RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 WNT2BQ93097 391 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 ZNF524Q96C55 264 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 MRGPRX4Q96LA9 322 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 ELAC2Q9BQ52 826 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 THUMPD3Q9BV44 507 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 NSRP1Q9H0G5 558 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 TMEM38AQ9H6F2 299 aa16.43■□□□□ 0.22
PDLIM7-209ENST00000503346 HECTD1Q9ULT8 2610 aa16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 H0YC42 278 aa16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 SEC14L5O43304 696 aa16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 IL2RAP01589 272 aa16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 THBS1P07996 1170 aa16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 TPD52P55327 224 aaPredicted RBP16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 DLX5P56178 289 aa16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 GNGT1P63211 74 aa16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 TRMT5Q32P41 509 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 LIN52Q52LA3 116 aa16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 RPS26P11Q5JNZ5 115 aaPredicted RBP16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 CHMP1BQ7LBR1 199 aa16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 C9orf106Q8NAJ2 232 aa16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 OR52P1PQ8NH57 321 aa16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 ST8SIA1Q92185 356 aa16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 SMPDL3BQ92485 455 aa16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 CNOT9Q92600 299 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 ADGRG7Q96K78 797 aa16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 DNAJB12Q9NXW2 375 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 ARMCX1Q9P291 453 aa16.42■□□□□ 0.22
PDLIM7-209ENST00000503346 FLNBO75369 2602 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 C5orf58C9J3I9 102 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 PRSS44E7EML9 344 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 SNX3O60493 162 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 PGM3O95394 542 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 NPPAP01160 153 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 IL11P20809 199 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 HTR1EP28566 365 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 SLC6A8P48029 635 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 RPS3AP61247 264 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 CDK6Q00534 326 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 ADRM1Q16186 407 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 ZSWIM7Q19AV6 140 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 MMEL1Q495T6 779 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 MRPL2Q5T653 305 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 RNF220Q5VTB9 566 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 REP15Q6BDI9 236 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 SNX32Q86XE0 403 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 VRK2Q86Y07 508 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 NAXEQ8NCW5 288 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 TMEM234Q8WY98 164 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 ZFP3Q96NJ6 502 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 TM9SF2Q99805 663 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 FAM107BQ9H098 131 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 ACER3Q9NUN7 267 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 ZNF443Q9Y2A4 671 aaPredicted RBP16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 IFT52Q9Y366 437 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 MED12Q93074 2177 aa16.41■□□□□ 0.22
PDLIM7-209ENST00000503346 ICE1Q9Y2F5 2266 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 LOC100653049A0A140TA62 436 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 CDHR4A6H8M9 788 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 FXYD1O00168 92 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 MRASO14807 208 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 ADAMDEC1O15204 470 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 EFNA2O43921 213 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 ADAM11O75078 769 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 KRT34O76011 436 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 RCBTB2O95199 551 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 ETS2P15036 469 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 ME2P23368 584 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 SESN3P58005 492 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 MTPNP58546 118 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 EEF1A1P68104 462 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 CYLC2Q14093 348 aaPredicted RBP16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 SELPLGQ14242 412 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 LARS2Q15031 903 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 CTU2Q2VPK5 515 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 REEP3Q6NUK4 255 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 ZNF836Q6ZNA1 936 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 ESPNLQ6ZVH7 1005 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 CPLX4Q7Z7G2 160 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 GRAMD2AQ8IUY3 354 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 LIX1LQ8IVB5 337 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 LILRA2Q8N149 483 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 NFKBIDQ8NI38 313 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 LRRC58Q96CX6 371 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 CCDC106Q9BWC9 280 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 KAT8Q9H7Z6 458 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 CACYBPQ9HB71 228 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 CHST11Q9NPF2 352 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 PAQR5Q9NXK6 330 aaPredicted RBP16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 ZNF629Q9UEG4 869 aaPredicted RBP16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 ZNF232Q9UNY5 417 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 ZNF175Q9Y473 711 aa16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 SPTBN1Q01082 2364 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-209ENST00000503346 FAAHO00519 579 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 EIF1AYO14602 144 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 TGM6O95932 706 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 PABPC4LP0CB38 370 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 GRNP28799 593 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 ZNF136P52737 540 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 RBBP4Q09028 425 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 SELENBP1Q13228 472 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms