RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 RPL3LQ92901 407 aaKnown RBP10.73□□□□□ -0.69
USP46-204ENST00000503060 SLC41A3Q96GZ6 507 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 POLDIP3Q9BY77 421 aaKnown RBP10.73□□□□□ -0.69
USP46-204ENST00000503060 FBXO34Q9NWN3 711 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 TAS2R16Q9NYV7 291 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 AQP9O43315 295 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 FOXS1O43638 330 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 PRKYO43930 277 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 KIAA0513O60268 411 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 THY1P04216 161 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 RNH1P13489 461 aaKnown RBP10.72□□□□□ -0.69
USP46-204ENST00000503060 IL9P15248 144 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 GABRA3P34903 492 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 PCYT1AP49585 367 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 STARP49675 285 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 ZNF136P52737 540 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 NXPH1P58417 271 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 SKP1P63208 163 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 POU6F2P78424 691 aaPredicted RBP10.72□□□□□ -0.69
USP46-204ENST00000503060 DECR1Q16698 335 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 ZNF829Q3KNS6 432 aaPredicted RBP10.72□□□□□ -0.69
USP46-204ENST00000503060 MEDAGQ5VYS4 303 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 ACSM5Q6NUN0 579 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 ZNF367Q7RTV3 350 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 SLC46A3Q7Z3Q1 461 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 ACOT11Q8WXI4 607 aaPredicted RBP10.72□□□□□ -0.69
USP46-204ENST00000503060 LGALS12Q96DT0 336 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 HSPA12BQ96MM6 686 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 PLA2G12AQ9BZM1 189 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 TNFRSF10DQ9UBN6 386 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 WNT16Q9UBV4 365 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 PCDHGA3Q9Y5H0 932 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 GON4LQ3T8J9 2241 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 GXYLT2A0PJZ3 443 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 LMO7DNF2Z398 122 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 NDUFA2O43678 99 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 GATCO43716 136 aaKnown RBP10.72□□□□□ -0.69
USP46-204ENST00000503060 NKX2-2O95096 273 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 OMPP47874 163 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 GABRA4P48169 554 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 BMXP51813 675 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 SMSP52788 366 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 GBX2P52951 348 aaPredicted RBP10.72□□□□□ -0.69
USP46-204ENST00000503060 HNRNPKP61978 463 aaKnown RBP eCLIP10.72□□□□□ -0.69
USP46-204ENST00000503060 SCRN3Q0VDG4 424 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 MAP4K2Q12851 820 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 ZNF155Q12901 538 aaPredicted RBP10.72□□□□□ -0.69
USP46-204ENST00000503060 DEFB133Q30KQ1 61 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 ARMCX4Q5H9R4 360 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 FIGNL1Q6PIW4 674 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 RASSF6Q6ZTQ3 369 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 RRM2BQ7LG56 351 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 SLCO6A1Q86UG4 719 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 VWA5B2Q8N398 1253 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 FAM169BQ8N8A8 192 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 OR52R1Q8NGF1 315 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 ANGPTL6Q8NI99 470 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 DYNC2LI1Q8TCX1 351 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 HOXB13Q92826 284 aaPredicted RBP10.72□□□□□ -0.69
USP46-204ENST00000503060 RFKQ969G6 155 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 BORCS5Q969J3 196 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 FAM46AQ96IP4 442 aaKnown RBP10.72□□□□□ -0.69
USP46-204ENST00000503060 ZNF285Q96NJ3 590 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 EGLN3Q9H6Z9 239 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 CNIH4Q9P003 139 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 KCNE5Q9UJ90 142 aa10.72□□□□□ -0.69
USP46-204ENST00000503060 RPL36Q9Y3U8 105 aaKnown RBP10.72□□□□□ -0.69
USP46-204ENST00000503060 NPIPA5A0A0B4J1W7 369 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 EFCAB9A8MZ26 197 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 B8ZZF3 427 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 NPIPA7E9PJI5 369 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 TGFBR3LH3BV60 316 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 TLX2O43763 284 aaPredicted RBP10.71□□□□□ -0.69
USP46-204ENST00000503060 AIREO43918 545 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 NPIPA8P0DM63 369 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 NID1P14543 1247 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 CPEP16870 476 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 GADD45AP24522 165 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 GFERP55789 205 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 ZNF91Q05481 1191 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 DGUOKQ16854 277 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 SLC25A30Q5SVS4 291 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 NIPAL1Q6NVV3 410 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 MBOAT2Q6ZWT7 520 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 BCDIN3DQ7Z5W3 292 aaKnown RBP10.71□□□□□ -0.69
USP46-204ENST00000503060 FJX1Q86VR8 437 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 SPEM1Q8N4L4 309 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 WDR36Q8NI36 951 aaKnown RBP10.71□□□□□ -0.69
USP46-204ENST00000503060 PEX11GQ96HA9 241 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 TGM7Q96PF1 710 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 TSSK6Q9BXA6 273 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 DSN1Q9H410 356 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 PLCL2Q9UPR0 1127 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 PCDHGB6Q9Y5F9 930 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 PMF1-BGLAPU3KQ54 211 aa10.71□□□□□ -0.69
USP46-204ENST00000503060 A0A0A6YYJ9 748 aa10.7□□□□□ -0.7
USP46-204ENST00000503060 HYKKA2RU49 373 aa10.7□□□□□ -0.7
USP46-204ENST00000503060 PEX12O00623 359 aa10.7□□□□□ -0.7
USP46-204ENST00000503060 CTNSO60931 367 aa10.7□□□□□ -0.7
USP46-204ENST00000503060 SDC3O75056 442 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms