RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ST3GAL4Q11206 333 aa20.21■□□□□ 0.83
PTPN13-205ENST00000502971 SF3A2Q15428 464 aaKnown RBP20.21■□□□□ 0.83
PTPN13-205ENST00000502971 TBCEQ15813 527 aaPredicted RBP20.21■□□□□ 0.83
PTPN13-205ENST00000502971 MRPL14Q6P1L8 145 aaKnown RBP20.21■□□□□ 0.83
PTPN13-205ENST00000502971 CCDC81Q6ZN84 652 aa20.21■□□□□ 0.83
PTPN13-205ENST00000502971 CADM2Q8N3J6 435 aa20.21■□□□□ 0.83
PTPN13-205ENST00000502971 NFAM1Q8NET5 270 aaPredicted RBP20.21■□□□□ 0.83
PTPN13-205ENST00000502971 BRIX1Q8TDN6 353 aaKnown RBP20.21■□□□□ 0.83
PTPN13-205ENST00000502971 DNAJA4Q8WW22 397 aaPredicted RBP20.21■□□□□ 0.83
PTPN13-205ENST00000502971 LRFN5Q96NI6 719 aa20.21■□□□□ 0.83
PTPN13-205ENST00000502971 SPSB2Q99619 263 aa20.21■□□□□ 0.83
PTPN13-205ENST00000502971 NRSN2Q9GZP1 204 aa20.21■□□□□ 0.83
PTPN13-205ENST00000502971 RPL36Q9Y3U8 105 aaKnown RBP20.21■□□□□ 0.83
PTPN13-205ENST00000502971 MUC6Q6W4X9 2439 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 NGFRP08138 427 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 STSP08842 583 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 MAKP20794 623 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 ACVR2AP27037 513 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 C21orf33P30042 268 aaPredicted RBP20.2■□□□□ 0.82
PTPN13-205ENST00000502971 PNLIPRP2P54317 469 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 FOXL2P58012 376 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 RNF4P78317 190 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 NDUFAF6Q330K2 333 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 UBE2UQ5VVX9 321 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 RPL13AP3Q6NVV1 102 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 KIRREL2Q6UWL6 708 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 ERI1Q8IV48 349 aaKnown RBP20.2■□□□□ 0.82
PTPN13-205ENST00000502971 PRR22Q8IZ63 422 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 C9orf43Q8TAL5 461 aaPredicted RBP20.2■□□□□ 0.82
PTPN13-205ENST00000502971 FGF11Q92914 225 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 BPIFA2Q96DR5 249 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 CCNL2Q96S94 520 aaPredicted RBP20.2■□□□□ 0.82
PTPN13-205ENST00000502971 DPH1Q9BZG8 443 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 WDR54Q9H977 334 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 TMEM9BQ9NQ34 198 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 C20orf141Q9NUB4 165 aa20.2■□□□□ 0.82
PTPN13-205ENST00000502971 C19orf25Q9UFG5 118 aaPredicted RBP20.2■□□□□ 0.82
PTPN13-205ENST00000502971 WARS2Q9UGM6 360 aaKnown RBP20.2■□□□□ 0.82
PTPN13-205ENST00000502971 NXT1Q9UKK6 140 aaKnown RBP20.2■□□□□ 0.82
PTPN13-205ENST00000502971 IGHV3-20A0A0C4DH32 117 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 CCKBRP32239 447 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 CD226Q15762 336 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 LCN10Q6JVE6 187 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 TMEM205Q6UW68 189 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 SLCO6A1Q86UG4 719 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 TMEM163Q8TC26 289 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 PHOSPHO1Q8TCT1 267 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 RAB2BQ8WUD1 216 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 OMA1Q96E52 524 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 ARSGQ96EG1 525 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 CRB3Q9BUF7 120 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 EDEM2Q9BV94 578 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 MEPEQ9NQ76 525 aaPredicted RBP20.19■□□□□ 0.82
PTPN13-205ENST00000502971 MED17Q9NVC6 651 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 DNAJC27Q9NZQ0 273 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 A0A1W2PQD3 144 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 CDC14CA4D256 554 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 B4E171 279 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 H3BMQ9 156 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 GTPBP1O00178 669 aaKnown RBP20.19■□□□□ 0.82
PTPN13-205ENST00000502971 ZNF264O43296 627 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 ICOSLGO75144 302 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 CNOT3O75175 753 aaKnown RBP20.19■□□□□ 0.82
PTPN13-205ENST00000502971 KLK3P07288 261 aaPredicted RBP20.19■□□□□ 0.82
PTPN13-205ENST00000502971 ENDOUP21128 410 aaKnown RBP20.19■□□□□ 0.82
PTPN13-205ENST00000502971 TSPAN7P41732 249 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 SKP2Q13309 424 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 PGGHGQ32M88 737 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 HSDL2Q6YN16 418 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 CPEB2Q7Z5Q1 589 aaKnown RBP20.19■□□□□ 0.82
PTPN13-205ENST00000502971 CYP4Z2PQ8N1L4 340 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 APCDD1LQ8NCL9 501 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 OR2T33Q8NG76 320 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 COG8Q96MW5 612 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 CDCA4Q9BXL8 241 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 ATP13A2Q9NQ11 1180 aa20.19■□□□□ 0.82
PTPN13-205ENST00000502971 AKAP7Q9P0M2 348 aaPredicted RBP20.19■□□□□ 0.82
PTPN13-205ENST00000502971 GPN3Q9UHW5 284 aaPredicted RBP20.19■□□□□ 0.82
PTPN13-205ENST00000502971 ASCC3Q8N3C0 2202 aaKnown RBP20.18■□□□□ 0.82
PTPN13-205ENST00000502971 SNTNA6NMZ2 147 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 KPNA4O00629 521 aaPredicted RBP20.18■□□□□ 0.82
PTPN13-205ENST00000502971 RCBTB2O95199 551 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 HMGN1P05114 100 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 CCL4P13236 92 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 PTNP21246 168 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 ABCD3P28288 659 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 ST13P50502 369 aaKnown RBP20.18■□□□□ 0.82
PTPN13-205ENST00000502971 LSAMPQ13449 338 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 IRF3Q14653 427 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 SYT14P1Q58G82 188 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 CLEC12AQ5QGZ9 265 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 PLAG1Q6DJT9 500 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 WBP2NLQ6ICG8 309 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 PAPD4Q6PIY7 484 aaKnown RBP20.18■□□□□ 0.82
PTPN13-205ENST00000502971 APOOLQ6UXV4 268 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 GATSQ8NAP1 163 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 OR4Q3Q8NH05 313 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 NUBPLQ8TB37 319 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 VMP1Q96GC9 406 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 CRELD1Q96HD1 420 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms