RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 SAMD8Q96LT4 415 aa16.75■□□□□ 0.27
LINC00535-201ENST00000501400 OR52D1Q9H346 318 aa16.75■□□□□ 0.27
LINC00535-201ENST00000501400 COPS7AQ9UBW8 275 aa16.75■□□□□ 0.27
LINC00535-201ENST00000501400 CFAP54Q96N23 3096 aa16.75■□□□□ 0.27
LINC00535-201ENST00000501400 TTC28Q96AY4 2481 aa16.75■□□□□ 0.27
LINC00535-201ENST00000501400 TO15178 435 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 SURF4O15260 269 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 ICOSLGO75144 302 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 LIPAP38571 399 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 NR0B1P51843 470 aaKnown RBP16.74■□□□□ 0.27
LINC00535-201ENST00000501400 SKP2Q13309 424 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 ANKRD37Q7Z713 158 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 SLCO6A1Q86UG4 719 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 CADM2Q8N3J6 435 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 OR13C2Q8NGS9 318 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 ADOQ96SZ5 270 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 CTRCQ99895 268 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 HOXD1Q9GZZ0 328 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 ENKD1Q9H0I2 346 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 ARRDC1-AS1Q9H2J1 176 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 HHATLQ9HCP6 504 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 EXPH5Q8NEV8 1989 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.74■□□□□ 0.27
LINC00535-201ENST00000501400 SYNDIG1LA6NDD5 238 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 VSTM2BA6NLU5 285 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 OR6C76A6NM76 312 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 TSPAN2O60636 221 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 CH25HO95992 272 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 FGF5P12034 268 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 RBM34P42696 430 aaKnown RBP16.74■□□□□ 0.27
LINC00535-201ENST00000501400 GAS1P54826 345 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 ROR2Q01974 943 aaKnown RBP16.74■□□□□ 0.27
LINC00535-201ENST00000501400 ZFP36L1Q07352 338 aaKnown RBP16.74■□□□□ 0.27
LINC00535-201ENST00000501400 SPCS2Q15005 226 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 MEDAGQ5VYS4 303 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 HSDL2Q6YN16 418 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 OVCH1Q7RTY7 1134 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 ZNF527Q8NB42 609 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 HS6ST2Q96MM7 605 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 SPSB2Q99619 263 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 RTN4RQ9BZR6 473 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 TMEM5Q9Y2B1 443 aa16.74■□□□□ 0.27
LINC00535-201ENST00000501400 RPL36Q9Y3U8 105 aaKnown RBP16.74■□□□□ 0.27
LINC00535-201ENST00000501400 KDM4EB2RXH2 506 aaPredicted RBP16.73■□□□□ 0.27
LINC00535-201ENST00000501400 UBL4AP11441 157 aa16.73■□□□□ 0.27
LINC00535-201ENST00000501400 TIGD6Q17RP2 521 aa16.73■□□□□ 0.27
LINC00535-201ENST00000501400 ULK3Q6PHR2 472 aa16.73■□□□□ 0.27
LINC00535-201ENST00000501400 CBLN3Q6UW01 205 aa16.73■□□□□ 0.27
LINC00535-201ENST00000501400 P2RY8Q86VZ1 359 aa16.73■□□□□ 0.27
LINC00535-201ENST00000501400 NFAM1Q8NET5 270 aaPredicted RBP16.73■□□□□ 0.27
LINC00535-201ENST00000501400 OR2T33Q8NG76 320 aa16.73■□□□□ 0.27
LINC00535-201ENST00000501400 C9orf43Q8TAL5 461 aaPredicted RBP16.73■□□□□ 0.27
LINC00535-201ENST00000501400 ATOH1Q92858 354 aaPredicted RBP16.73■□□□□ 0.27
LINC00535-201ENST00000501400 SLC38A2Q96QD8 506 aa16.73■□□□□ 0.27
LINC00535-201ENST00000501400 KLHDC3Q9BQ90 382 aa16.73■□□□□ 0.27
LINC00535-201ENST00000501400 UBQLN3Q9H347 655 aa16.73■□□□□ 0.27
LINC00535-201ENST00000501400 SIGLEC7Q9Y286 467 aa16.73■□□□□ 0.27
LINC00535-201ENST00000501400 SCDO00767 359 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 BHLHE40O14503 412 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 ALOX12BO75342 701 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 SLC2A10O95528 541 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 HEXBP07686 556 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 ZNF182P17025 639 aaPredicted RBP16.72■□□□□ 0.27
LINC00535-201ENST00000501400 FHL1Q13642 323 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 THSD4Q6ZMP0 1018 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 SLC29A4Q7RTT9 530 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 APCDD1LQ8NCL9 501 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 C3orf49Q96BT1 292 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 ZNF524Q96C55 264 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 OR5M11Q96RB7 305 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 PRRG3Q9BZD7 231 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 SEMA4CQ9C0C4 833 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 AKIRIN1Q9H9L7 192 aaPredicted RBP16.72■□□□□ 0.27
LINC00535-201ENST00000501400 SLC24A3Q9HC58 644 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 KMT2EQ8IZD2 1858 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 KIF26BQ2KJY2 2108 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 SAGE2PA6NJ88 616 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 PRODHO43272 600 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 HBQ1P09105 142 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 ZNF28P17035 718 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 MST1P26927 711 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 ABCD3P28288 659 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 CSTF2P33240 577 aaKnown RBP eCLIP16.72■□□□□ 0.27
LINC00535-201ENST00000501400 GRK6P43250 576 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 PLCXD2Q0VAA5 305 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 TRA2AQ13595 282 aaKnown RBP eCLIP16.72■□□□□ 0.27
LINC00535-201ENST00000501400 HLA-DQA1Q5Y7H0 255 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 DBX2Q6ZNG2 339 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 BMP8AQ7Z5Y6 402 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 ZNF440Q8IYI8 595 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 C17orf47Q8NEP4 570 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 PHOSPHO1Q8TCT1 267 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 PMEPA1Q969W9 287 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 OMA1Q96E52 524 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 WDR77Q9BQA1 342 aaPredicted RBP16.72■□□□□ 0.27
LINC00535-201ENST00000501400 BCL7BQ9BQE9 202 aa16.72■□□□□ 0.27
LINC00535-201ENST00000501400 EXOSC3Q9NQT5 275 aaKnown RBP16.72■□□□□ 0.27
LINC00535-201ENST00000501400 MRTO4Q9UKD2 239 aaKnown RBP16.72■□□□□ 0.27
LINC00535-201ENST00000501400 LSM2Q9Y333 95 aaKnown RBP16.72■□□□□ 0.27
LINC00535-201ENST00000501400 MPDZO75970 2070 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms