RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 CDC42EP2O14613 210 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 KLF7O75840 302 aaPredicted RBP23.88■■□□□ 1.41
HOXB3-212ENST00000498678 SLC26A5P58743 744 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 PSPHP78330 225 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 PRKCDQ05655 676 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 NCF4Q15080 339 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 NEDD8Q15843 81 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 XAF1Q6GPH4 301 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 ACSM5Q6NUN0 579 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 ULK3Q6PHR2 472 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 LINC00114Q6XXX2 140 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 C16orf47Q6ZP98 133 aaPredicted RBP23.88■■□□□ 1.41
HOXB3-212ENST00000498678 OR8D4Q8NGM9 314 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 MPP4Q96JB8 637 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 TMX2-CTNND1H3BSU7 103 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 UMODP07911 640 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 BORAQ6PGQ7 559 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 CASP12Q6UXS9 341 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 ALDH16A1Q8IZ83 802 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 EXOSC3Q9NQT5 275 aaKnown RBP23.88■■□□□ 1.41
HOXB3-212ENST00000498678 CARD8Q9Y2G2 431 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 MED31Q9Y3C7 131 aa23.88■■□□□ 1.41
HOXB3-212ENST00000498678 LOC102723996A0A087X1L8 192 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 TRBV11-1A0A0K0K1C0 115 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 TNFRSF10AO00220 468 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 ZNF264O43296 627 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 NGFRP08138 427 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 IFI30P13284 250 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 JUNBP17275 347 aaPredicted RBP23.87■■□□□ 1.41
HOXB3-212ENST00000498678 SNRPGP62308 76 aaKnown RBP23.87■■□□□ 1.41
HOXB3-212ENST00000498678 CSRP2Q16527 193 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 CBLN3Q6UW01 205 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 TEX47Q8TBZ9 253 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 DGCR14Q96DF8 476 aaKnown RBP23.87■■□□□ 1.41
HOXB3-212ENST00000498678 IL4I1Q96RQ9 567 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 CCDC90BQ9GZT6 254 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 SLC25A19Q9HC21 320 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 AMBNQ9NP70 447 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 PARD6AQ9NPB6 346 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 ATP13A2Q9NQ11 1180 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 MEPEQ9NQ76 525 aaPredicted RBP23.87■■□□□ 1.41
HOXB3-212ENST00000498678 TOR4AQ9NXH8 423 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 IL20Q9NYY1 176 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 RPS6KB2Q9UBS0 482 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 PTRH2Q9Y3E5 179 aaKnown RBP23.87■■□□□ 1.41
HOXB3-212ENST00000498678 SNX5Q9Y5X3 404 aa23.87■■□□□ 1.41
HOXB3-212ENST00000498678 TMEM200CA6NKL6 621 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 H3BSA7 217 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 GTPBP1O00178 669 aaKnown RBP23.86■■□□□ 1.41
HOXB3-212ENST00000498678 STK17BO94768 372 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 MAKP20794 623 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 OR8K3Q8NH51 312 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 WDR36Q8NI36 951 aaKnown RBP23.86■■□□□ 1.41
HOXB3-212ENST00000498678 THAP3Q8WTV1 239 aaPredicted RBP23.86■■□□□ 1.41
HOXB3-212ENST00000498678 TRUB1Q8WWH5 349 aaKnown RBP23.86■■□□□ 1.41
HOXB3-212ENST00000498678 IPCEF1Q8WWN9 437 aaPredicted RBP23.86■■□□□ 1.41
HOXB3-212ENST00000498678 LIN37Q96GY3 246 aaPredicted RBP23.86■■□□□ 1.41
HOXB3-212ENST00000498678 DPH1Q9BZG8 443 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 TVP23BQ9NYZ1 205 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 PSORS1C1Q9UIG5 152 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 KPNA4O00629 521 aaPredicted RBP23.86■■□□□ 1.41
HOXB3-212ENST00000498678 RBM34P42696 430 aaKnown RBP23.86■■□□□ 1.41
HOXB3-212ENST00000498678 SMSP52788 366 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 NUDT6P53370 316 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 NRG3P56975 720 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 ZBED5Q49AG3 693 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 GPR141Q7Z602 305 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 ZBTB20Q9HC78 741 aaPredicted RBP23.86■■□□□ 1.41
HOXB3-212ENST00000498678 CCNB1IP1Q9NPC3 277 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 PTTG2Q9NZH5 202 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 PISDQ9UG56 409 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 NPFFR2Q9Y5X5 522 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 CEPT1Q9Y6K0 416 aa23.86■■□□□ 1.41
HOXB3-212ENST00000498678 A0A1W2PQD3 144 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 ALG1L2C9J202 215 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 ZNF354AO60765 605 aaPredicted RBP23.85■■□□□ 1.41
HOXB3-212ENST00000498678 CSO75390 466 aaKnown RBP23.85■■□□□ 1.41
HOXB3-212ENST00000498678 NAT1P18440 290 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 PCMT1P22061 227 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 CTBP2P56545 445 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 COPZ1P61923 177 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 SLC27A4Q6P1M0 643 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 ZNF620Q6ZNG0 422 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 MARCH3Q86UD3 253 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 BPIFA2Q96DR5 249 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 TAAR9Q96RI9 348 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 ZPBPQ9BS86 351 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 CLN6Q9NWW5 311 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 OR6C70A6NIJ9 312 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 TCF15Q12870 199 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 RAB39AQ14964 217 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 TMPRSS11FQ6ZWK6 438 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 AHSA2Q719I0 299 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 MRGPREQ86SM8 312 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 OR8J1Q8NGP2 316 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 DNAJA4Q8WW22 397 aaPredicted RBP23.85■■□□□ 1.41
HOXB3-212ENST00000498678 OSTF1Q92882 214 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 SIGLEC11Q96RL6 698 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 LAT2Q9GZY6 243 aa23.85■■□□□ 1.41
HOXB3-212ENST00000498678 TIMMDC1Q9NPL8 285 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms