RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 PGM3O95394 542 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 SDC1P18827 310 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 SLC7A1P30825 629 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 P2RX1P51575 399 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 SUMO3P55854 103 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-212ENST00000498540 RAC3P60763 192 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 RASGEF1BQ0VAM2 473 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 SELENBP1Q13228 472 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 PDE7AQ13946 482 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 KLHL26Q53HC5 615 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 ZCCHC12Q6PEW1 402 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 LRIG3Q6UXM1 1119 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 IL17RELQ6ZVW7 336 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 MTERF4Q7Z6M4 381 aaKnown RBP12.96□□□□□ -0.33
TRAF4-212ENST00000498540 MUC15Q8N387 334 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 C17orf53Q8N3J3 647 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-212ENST00000498540 ZNF433Q8N7K0 673 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-212ENST00000498540 CLHC1Q8NHS4 586 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 GPR119Q8TDV5 335 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 C10orf105Q8TEF2 133 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 FAM168AQ92567 244 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 FAM120BQ96EK7 910 aaKnown RBP12.96□□□□□ -0.33
TRAF4-212ENST00000498540 TSSK3Q96PN8 268 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 DHRS9Q9BPW9 319 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 REEP4Q9H6H4 257 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 ANKZF1Q9H8Y5 726 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 SIRT3Q9NTG7 399 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-212ENST00000498540 SH3BP4Q9P0V3 963 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 EMCNQ9ULC0 261 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 G3V2L1 256 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 CYTIPO60759 359 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 TBX19O60806 448 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 RAD51DO75771 328 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 H6PDO95479 791 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 HSPA4LO95757 839 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 HMGN2P05204 90 aaKnown RBP12.95□□□□□ -0.34
TRAF4-212ENST00000498540 PYGBP11216 843 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 PRPH2P23942 346 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 IGFBP5P24593 272 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 ZNF83P51522 516 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 LASP1Q14847 261 aaKnown RBP12.95□□□□□ -0.34
TRAF4-212ENST00000498540 RAB35Q15286 201 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 CYB5R2Q6BCY4 276 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 CLEC6AQ6EIG7 209 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 SLC22A25Q6T423 547 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 FRMD7Q6ZUT3 714 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 P2RY8Q86VZ1 359 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 OR2T11Q8NH01 316 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 OR52N5Q8NH56 324 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 IFT81Q8WYA0 676 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 CHMP6Q96FZ7 201 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 RADILQ96JH8 1075 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 FCRL1Q96LA6 429 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 MRGPRX4Q96LA9 322 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 CCT7Q99832 543 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 IQCGQ9H095 443 aaKnown RBP12.95□□□□□ -0.34
TRAF4-212ENST00000498540 TSPYL1Q9H0U9 437 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 DUSP22Q9NRW4 184 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 ACSS1Q9NUB1 689 aaPredicted RBP12.95□□□□□ -0.34
TRAF4-212ENST00000498540 ZCCHC3Q9NUD5 404 aaKnown RBP12.95□□□□□ -0.34
TRAF4-212ENST00000498540 C1orf109Q9NX04 203 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 BAIAP2L1Q9UHR4 511 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 POU2F3Q9UKI9 436 aa12.95□□□□□ -0.34
TRAF4-212ENST00000498540 A0A1W2PR80 420 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 ZNF724A8MTY0 619 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 H7C417 338 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 LMX1BO60663 402 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 LY6HO94772 140 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 IGHV3-9P01782 118 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 GSTA1P08263 222 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 SRD5A1P18405 259 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 ATP6V1C1P21283 382 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 CD40P25942 277 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 THBS2P35442 1172 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 FABP6P51161 128 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 ETF1P62495 437 aaKnown RBP12.94□□□□□ -0.34
TRAF4-212ENST00000498540 ARL13AQ5H913 290 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-212ENST00000498540 SLC25A53Q5H9E4 307 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 CDC73Q6P1J9 531 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 TMEM108Q6UXF1 575 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 ZYG11AQ6WRX3 759 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 SSX8Q7RTT4 187 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 ZNF100Q8IYN0 542 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 FBXL14Q8N1E6 418 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 ZNF527Q8NB42 609 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 RFWD2Q8NHY2 731 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 METTL2AQ96IZ6 378 aaKnown RBP12.94□□□□□ -0.34
TRAF4-212ENST00000498540 OR5B2Q96R09 309 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 STACQ99469 402 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 PIGUQ9H490 435 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 MGAT4BQ9UQ53 548 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 SLC25A15Q9Y619 301 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 KCNE3Q9Y6H6 103 aa12.94□□□□□ -0.34
TRAF4-212ENST00000498540 SLC35F4A4IF30 521 aa12.93□□□□□ -0.34
TRAF4-212ENST00000498540 ESPNB1AK53 854 aa12.93□□□□□ -0.34
TRAF4-212ENST00000498540 H3BNH8 94 aa12.93□□□□□ -0.34
TRAF4-212ENST00000498540 DHRS4L1P0CG22 281 aa12.93□□□□□ -0.34
TRAF4-212ENST00000498540 UROSP10746 265 aa12.93□□□□□ -0.34
TRAF4-212ENST00000498540 MYL2P10916 166 aa12.93□□□□□ -0.34
TRAF4-212ENST00000498540 USF1P22415 310 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms