RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 SGMS2Q8NHU3 365 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 RFWD2Q8NHY2 731 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 FBXO25Q8TCJ0 367 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 FOXN4Q96NZ1 517 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 MS4A4EQ96PG1 132 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 SORCS2Q96PQ0 1159 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 OR5B2Q96R09 309 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 MRPL57Q9BQC6 102 aaKnown RBP10.25□□□□□ -0.77
CDK9-205ENST00000498339 BHLHE41Q9C0J9 482 aaPredicted RBP10.25□□□□□ -0.77
CDK9-205ENST00000498339 IQCGQ9H095 443 aaKnown RBP10.25□□□□□ -0.77
CDK9-205ENST00000498339 GIN1Q9NXP7 522 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 EMC3Q9P0I2 261 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 CARD8Q9Y2G2 431 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 UTP11Q9Y3A2 253 aaKnown RBP10.25□□□□□ -0.77
CDK9-205ENST00000498339 TIMM22Q9Y584 194 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 SLC25A15Q9Y619 301 aa10.25□□□□□ -0.77
CDK9-205ENST00000498339 A0A1W2PQD3 144 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 LRP5LA4QPB2 252 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 H3BNH8 94 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 GTPBP1O00178 669 aaKnown RBP10.24□□□□□ -0.77
CDK9-205ENST00000498339 SMAD9O15198 467 aaKnown RBP10.24□□□□□ -0.77
CDK9-205ENST00000498339 PDPK1O15530 556 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 EFNA2O43921 213 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 INHBAP08476 426 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 ALOX5P09917 674 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 CREB1P16220 341 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 ATP6V1C1P21283 382 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 APEX1P27695 318 aaKnown RBP10.24□□□□□ -0.77
CDK9-205ENST00000498339 APOBEC3AP31941 199 aaPredicted RBP10.24□□□□□ -0.77
CDK9-205ENST00000498339 PHBP35232 272 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 SERPINB4P48594 390 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 P2RX1P51575 399 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 CAV1Q03135 178 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 DUSP5Q16690 384 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 FAM71E1Q6IPT2 247 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 C3orf33Q6P1S2 294 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 GALNT18Q6P9A2 607 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 ANKS4BQ8N8V4 417 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 ZNF527Q8NB42 609 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 ZNF540Q8NDQ6 660 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 CEP70Q8NHQ1 597 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 ZFP28Q8NHY6 868 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 APH1AQ96BI3 265 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 ARL8AQ96BM9 186 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 KCNA7Q96RP8 456 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 ZNF382Q96SR6 550 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 ANKZF1Q9H8Y5 726 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 MYOZ1Q9NP98 299 aaPredicted RBP10.24□□□□□ -0.77
CDK9-205ENST00000498339 TAS2R16Q9NYV7 291 aa10.24□□□□□ -0.77
CDK9-205ENST00000498339 TMEFF2Q9UIK5 374 aaPredicted RBP10.24□□□□□ -0.77
CDK9-205ENST00000498339 ING1Q9UK53 422 aaPredicted RBP10.24□□□□□ -0.77
CDK9-205ENST00000498339 NOSIPQ9Y314 301 aaKnown RBP10.24□□□□□ -0.77
CDK9-205ENST00000498339 NPIPA5A0A0B4J1W7 369 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 ZNF724A8MTY0 619 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 NPIPA7E9PJI5 369 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 ATP6V1G2-DDX39BF2Z307 99 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 NPIPA8P0DM63 369 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 PRKCAP17252 672 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 TAC1P20366 129 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 LCN1P31025 176 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 SUMO3P55854 103 aaPredicted RBP10.23□□□□□ -0.77
CDK9-205ENST00000498339 GNG11P61952 73 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 POU6F2P78424 691 aaPredicted RBP10.23□□□□□ -0.77
CDK9-205ENST00000498339 C2orf54Q08AI8 447 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 TRADDQ15628 312 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 TOMM34Q15785 309 aaPredicted RBP10.23□□□□□ -0.77
CDK9-205ENST00000498339 NDUFAF6Q330K2 333 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 C9orf135Q5VTT2 229 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 FBXW9Q5XUX1 488 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 ANKRD26P1Q6NSI1 321 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 CBLN3Q6UW01 205 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 MTERF4Q7Z6M4 381 aaKnown RBP10.23□□□□□ -0.77
CDK9-205ENST00000498339 SLC16A11Q8NCK7 471 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 CIDECQ96AQ7 238 aaPredicted RBP10.23□□□□□ -0.77
CDK9-205ENST00000498339 MRGPRX4Q96LA9 322 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 TMEM237Q96Q45 408 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 NAPGQ99747 312 aaPredicted RBP10.23□□□□□ -0.77
CDK9-205ENST00000498339 KCNS3Q9BQ31 491 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 SOX7Q9BT81 388 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 C1QTNF3Q9BXJ4 246 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 METTL17Q9H7H0 456 aaPredicted RBP10.23□□□□□ -0.77
CDK9-205ENST00000498339 ASB6Q9NWX5 421 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 METRNQ9UJH8 293 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 STK38LQ9Y2H1 464 aa10.23□□□□□ -0.77
CDK9-205ENST00000498339 MEGF8Q7Z7M0 2845 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 OIP5O43482 229 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 CRCPO75575 148 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 RGS9O75916 674 aaPredicted RBP10.22□□□□□ -0.77
CDK9-205ENST00000498339 SNUPNO95149 360 aaKnown RBP10.22□□□□□ -0.77
CDK9-205ENST00000498339 VENTXO95231 258 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 ENO1P06733 434 aaKnown RBP10.22□□□□□ -0.77
CDK9-205ENST00000498339 IFI6P09912 130 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 EGR1P18146 543 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 CHN2P52757 468 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 GUCY2DQ02846 1103 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 UNC50Q53HI1 259 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 ZNF678Q5SXM1 525 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 OR7E24Q6IFN5 339 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 KLHL24Q6TFL4 600 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 LRIG3Q6UXM1 1119 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms