RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 ACOT7O00154 380 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 SOCS2O14508 198 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 CASC3O15234 703 aaKnown RBP4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 ACOX3O15254 700 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 PRAMEF2O60811 474 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 RFPL3O75679 317 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 MFN2O95140 757 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 MT-ND1P03886 318 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 OPN1SWP03999 348 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 SEMG1P04279 462 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 PABPC4LP0CB38 370 aaKnown RBP4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 RHCEP18577 417 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 CDH2P19022 906 aaPredicted RBP4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 FPR1P21462 350 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 ACP1P24666 158 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 CSTF2P33240 577 aaKnown RBP eCLIP4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 OR1D4P47884 311 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 KCNJ5P48544 419 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 MAN2A2P49641 1150 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 ALDH3A2P51648 485 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 SMIM11AP58511 58 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 MAT1AQ00266 395 aaKnown RBP4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 ID2Q02363 134 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 OCA2Q04671 838 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 MGAT2Q10469 447 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 DBPQ10586 325 aaPredicted RBP4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 MERTKQ12866 999 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 IL11RAQ14626 422 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 LARS2Q15031 903 aaKnown RBP4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 RFX4Q33E94 735 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 TRMT12Q53H54 448 aaKnown RBP4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 ZNF311Q5JNZ3 666 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 OTUD3Q5T2D3 398 aaPredicted RBP4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 FHL5Q5TD97 284 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 MFSD4BQ5TF39 518 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 C1QL3Q5VWW1 255 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 TTC23Q5W5X9 447 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 HEPHL1Q6MZM0 1159 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 RHBDD2Q6NTF9 364 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 SHQ1Q6PI26 577 aaKnown RBP4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 FAM111BQ6SJ93 734 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 QSOX2Q6ZRP7 698 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 VTCN1Q7Z7D3 282 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 GALNT10Q86SR1 603 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 PPP1R3BQ86XI6 285 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 PEX5LQ8IYB4 626 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 MARVELD2Q8N4S9 558 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 METTL27Q8N6F8 245 aaPredicted RBP4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 FAM86B1Q8N7N1 296 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 SMYD1Q8NB12 490 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 CHDHQ8NE62 594 aaPredicted RBP4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 ZNF555Q8NEP9 628 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 OR7G1Q8NGA0 311 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 OR10Q1Q8NGQ4 319 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 B4GALNT2Q8NHY0 566 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 FAM110BQ8TC76 370 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 CTHRC1Q96CG8 243 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 GIMAP5Q96F15 307 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 SLC35A4Q96G79 324 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 C7orf34Q96L11 122 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 ART5Q96L15 291 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 OR6C1Q96RD1 312 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 EPYCQ99645 322 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 TREX2Q9BQ50 279 aaPredicted RBP4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 DPH1Q9BZG8 443 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 SERHL2Q9H4I8 314 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 ARMC7Q9H6L4 198 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 EVA1AQ9H8M9 152 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 CXorf21Q9HAI6 301 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 ADAP2Q9NPF8 381 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 POLE3Q9NRF9 147 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 DUSP22Q9NRW4 184 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 SMPD3Q9NY59 655 aaPredicted RBP4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 USE1Q9NZ43 259 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 DHCR7Q9UBM7 475 aaKnown RBP4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 PRODH2Q9UF12 536 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 SATB2Q9UPW6 733 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 CFL2Q9Y281 166 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 SLC9A8Q9Y2E8 581 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 SH3GLB1Q9Y371 365 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 SAMHD1Q9Y3Z3 626 aaKnown RBP4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 WDR45Q9Y484 360 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 PCDHGA1Q9Y5H4 931 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 AP4B1Q9Y6B7 739 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 MAU2Q9Y6X3 613 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 ENPP4Q9Y6X5 453 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 U3KQA8 63 aa4.89□□□□□ -1.63
HMGXB4-208ENST00000498325 ADGRG4Q8IZF6 3080 aa4.88□□□□□ -1.63
HMGXB4-208ENST00000498325 PI4KAP42356 2102 aa4.88□□□□□ -1.63
HMGXB4-208ENST00000498325 CSMD2Q7Z408 3487 aa4.88□□□□□ -1.63
HMGXB4-208ENST00000498325 A8MVJ9 347 aa4.88□□□□□ -1.63
HMGXB4-208ENST00000498325 H0YAE9 185 aa4.88□□□□□ -1.63
HMGXB4-208ENST00000498325 TMX2-CTNND1H3BSU7 103 aa4.88□□□□□ -1.63
HMGXB4-208ENST00000498325 MASP2O00187 686 aa4.88□□□□□ -1.63
HMGXB4-208ENST00000498325 TNFRSF11BO00300 401 aa4.88□□□□□ -1.63
HMGXB4-208ENST00000498325 SYT5O00445 386 aa4.88□□□□□ -1.63
HMGXB4-208ENST00000498325 NTN3O00634 580 aaPredicted RBP4.88□□□□□ -1.63
HMGXB4-208ENST00000498325 EI24O14681 340 aa4.88□□□□□ -1.63
HMGXB4-208ENST00000498325 POLR1CO15160 346 aaPredicted RBP4.88□□□□□ -1.63
HMGXB4-208ENST00000498325 HS6ST1O60243 411 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms