RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 PRKCAP17252 672 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 SHC1P29353 583 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 S100A3P33764 101 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 CHI3L1P36222 383 aaPredicted RBP7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 KHKP50053 298 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 CCR4P51679 360 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 NME5P56597 212 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 MAGOHP61326 146 aaKnown RBP7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 SELENBP1Q13228 472 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 QPRTQ15274 297 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 EXOC3L2Q2M3D2 409 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 TMEM176BQ3YBM2 270 aaPredicted RBP7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 SAXO2Q658L1 398 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 ATG16L1Q676U5 607 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 HEPHL1Q6MZM0 1159 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 TNFAIP8L2Q6P589 184 aaPredicted RBP7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 BEND4Q6ZU67 534 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 OLIG3Q7RTU3 272 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 ZNF550Q7Z398 422 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 SPATA19Q7Z5L4 167 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 ATP6V1C2Q8NEY4 427 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 RAB3IL1Q8TBN0 382 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 RNF128Q8TEB7 428 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 ZFP90Q8TF47 636 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 XAGE5Q8WWM1 108 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 ROBO4Q8WZ75 1007 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 MBD6Q96DN6 1003 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 ARSGQ96EG1 525 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 NEURL3Q96EH8 262 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 MRGPRX4Q96LA9 322 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 SLC35A5Q9BS91 424 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 KLHL4Q9C0H6 718 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 ZNF350Q9GZX5 532 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 LAT2Q9GZY6 243 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 FANCFQ9NPI8 374 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 POLE3Q9NRF9 147 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 NKIRAS1Q9NYS0 192 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 C6orf203Q9P0P8 240 aaPredicted RBP7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 MARCOQ9UEW3 520 aaPredicted RBP7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 BTNL2Q9UIR0 455 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 KCNE5Q9UJ90 142 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 WDR45Q9Y484 360 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 FREM1Q5H8C1 2179 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 CELSR1Q9NYQ6 3014 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 AKAP9Q99996 3911 aa7.58□□□□□ -1.2
HMGXB4-207ENST00000498212 F8P00451 2351 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 GOLGA8QA0A0J9YX86 632 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 CENPVL1A0A0U1RR11 272 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 A0A1W2PPR1 153 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 GOLGA8OA6NCC3 632 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 C9JVG2 144 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 GOLGA8NF8WBI6 632 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 SLCO1B7G3V0H7 640 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 KIAA0513O60268 411 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 NTN1O95631 604 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 GUSBP08236 651 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 PABPC4LP0CB38 370 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 UBTFL6P0CB48 400 aaPredicted RBP7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 CD99P14209 185 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 NID1P14543 1247 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 PGCP20142 388 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 CRYGSP22914 178 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 EPHA3P29320 983 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 IL12AP29459 219 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 AGTR1P30556 359 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 SLC7A1P30825 629 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 SLC18A1P54219 525 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 UFM1P61960 85 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 PPP2R2AP63151 447 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 HPCAP84074 193 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 LRRC74AQ0VAA2 488 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 FUT5Q11128 374 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 SKP2Q13309 424 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 RNPS1Q15287 305 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 DEFB113Q30KQ7 82 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 GPAT3Q53EU6 434 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 SLC25A53Q5H9E4 307 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 TMEM201Q5SNT2 666 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 BEND6Q5SZJ8 279 aaPredicted RBP7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 ANKRD34AQ69YU3 496 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 TYW3Q6IPR3 259 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 C3orf33Q6P1S2 294 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 STK32CQ86UX6 486 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 TGIF2LYQ8IUE0 185 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 TRIML2Q8N7C3 387 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 ABHD3Q8WU67 409 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 OIT3Q8WWZ8 545 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 RAB8BQ92930 207 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 ARL8AQ96BM9 186 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 ZNF524Q96C55 264 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 ROPN1LQ96C74 230 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 PIK3IP1Q96FE7 263 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 ZC3HAV1LQ96H79 300 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 TEX37Q96LM6 180 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 CCDC115Q96NT0 180 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 PANX1Q96RD7 426 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 ZBTB18Q99592 522 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 THUMPD3Q9BV44 507 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 SRXN1Q9BYN0 137 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 SAP130Q9H0E3 1048 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms