RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 SERHL2Q9H4I8 314 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 TIGARQ9NQ88 270 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 BOKQ9UMX3 212 aaPredicted RBP7.71□□□□□ -1.17
USP54-215ENST00000497106 FRS3O43559 492 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 SERPINI2O75830 405 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 SOX14O95416 240 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 EVI2BP34910 448 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 DLSTP36957 453 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 ADH7P40394 386 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 EEF1A1P68104 462 aaKnown RBP7.71□□□□□ -1.17
USP54-215ENST00000497106 DUSP2Q05923 314 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 ZFP36L1Q07352 338 aaKnown RBP7.71□□□□□ -1.17
USP54-215ENST00000497106 CD47Q08722 323 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 PMS2P3Q13401 168 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 PTGES3Q15185 160 aaKnown RBP7.71□□□□□ -1.17
USP54-215ENST00000497106 KLHL26Q53HC5 615 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 C1orf94Q6P1W5 598 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 PRSS48Q7RTY5 328 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 HMGN2P46Q86SG4 172 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 GPR32P1Q8NGA4 272 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 TM9SF4Q92544 642 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 JSRP1Q96MG2 331 aaPredicted RBP7.71□□□□□ -1.17
USP54-215ENST00000497106 POLDIP3Q9BY77 421 aaKnown RBP7.71□□□□□ -1.17
USP54-215ENST00000497106 ANKRA2Q9H9E1 313 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 SLC25A19Q9HC21 320 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 CNIH4Q9P003 139 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 GRHPRQ9UBQ7 328 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 KCNE3Q9Y6H6 103 aa7.71□□□□□ -1.17
USP54-215ENST00000497106 A6NIZ1 184 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 NPIPA5E9PKD4 350 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 ACOT7O00154 380 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 CBLP22681 906 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 APOBEC1P41238 236 aaKnown RBP7.71□□□□□ -1.18
USP54-215ENST00000497106 GPR4P46093 362 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 TAS2R43P59537 309 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 RAP1BP61224 184 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 RAP1AP62834 184 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 PLGLB1Q02325 96 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 CBX3Q13185 183 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 CDK5R2Q13319 367 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 RAPSNQ13702 412 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 POMZP3Q6PJE2 187 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 CACTIN-AS1Q8N1I8 211 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 KLHL36Q8N4N3 616 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 TCEANCQ8N8B7 351 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 RAB2BQ8WUD1 216 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 CNOT9Q92600 299 aaKnown RBP7.71□□□□□ -1.18
USP54-215ENST00000497106 IL4I1Q96RQ9 567 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 EXO5Q9H790 373 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 EXOSC4Q9NPD3 245 aaKnown RBP7.71□□□□□ -1.18
USP54-215ENST00000497106 NPIPA1Q9UND3 350 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 PCDHGB5Q9Y5G0 923 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 PCDHGA3Q9Y5H0 932 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 CORINQ9Y5Q5 1042 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 TRAV36DV7A0A075B6V5 113 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 IGKV3D-11A0A0A0MRZ8 115 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 ALG1L2C9J202 215 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 WWP2O00308 870 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 CDK2AP1O14519 115 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 SEC14L5O43304 696 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 TLX2O43763 284 aaPredicted RBP7.71□□□□□ -1.18
USP54-215ENST00000497106 GASTP01350 101 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 PRG2P13727 222 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 ZNF28P17035 718 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 SLC1A3P43003 542 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 SNRPGP62308 76 aaKnown RBP7.71□□□□□ -1.18
USP54-215ENST00000497106 PSG6Q00889 435 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 ITGADQ13349 1161 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 PON3Q15166 354 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 DGUOKQ16854 277 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 PGGHGQ32M88 737 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 CLEC12AQ5QGZ9 265 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 CXXC5Q7LFL8 322 aaKnown RBP7.71□□□□□ -1.18
USP54-215ENST00000497106 HS3ST5Q8IZT8 346 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 OR10H5Q8NGA6 315 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 OR4C15Q8NGM1 316 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 ZNF420Q8TAQ5 688 aaPredicted RBP7.71□□□□□ -1.18
USP54-215ENST00000497106 A4GNTQ9UNA3 340 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 CARD8Q9Y2G2 431 aa7.71□□□□□ -1.18
USP54-215ENST00000497106 OR6B1O95007 311 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 HSMCR30P0CW71 290 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 DCKP27707 260 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 PRKCDQ05655 676 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 ZNF615Q8N8J6 731 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 ZNF721Q8TF20 911 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 SIDT1Q9NXL6 827 aaKnown RBP7.7□□□□□ -1.18
USP54-215ENST00000497106 TNFRSF10DQ9UBN6 386 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 ACAD8Q9UKU7 415 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 CLCA1A8K7I4 914 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 GNB5O14775 395 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 BCL10O95999 233 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 GIMD1P0DJR0 217 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 CHMP24386 653 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 S100A5P33763 92 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 MGAT2Q10469 447 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 SLC22A10Q63ZE4 541 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 DEFB124Q8NES8 71 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 TMEM163Q8TC26 289 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 SLC7A13Q8TCU3 470 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 ZNF566Q969W8 418 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms