RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 SPRYD4Q8WW59 207 aaPredicted RBP12.04□□□□□ -0.48
GARNL3-220ENST00000496711 ASB15Q8WXK1 588 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 NACC2Q96BF6 587 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 TM9SF2Q99805 663 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 PELOQ9BRX2 385 aaKnown RBP12.04□□□□□ -0.48
GARNL3-220ENST00000496711 CHRNA10Q9GZZ6 450 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 ENKD1Q9H0I2 346 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 MIR1-1HGQ9H1L0 117 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 TPK1Q9H3S4 243 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 RERGLQ9H628 205 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 EPHA6Q9UF33 1036 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 BAIAP2Q9UQB8 552 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 TRAPPC4Q9Y296 219 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 MRPS17Q9Y2R5 130 aaKnown RBP12.04□□□□□ -0.48
GARNL3-220ENST00000496711 CAB39Q9Y376 341 aaPredicted RBP12.04□□□□□ -0.48
GARNL3-220ENST00000496711 CMAHPQ9Y471 501 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 MN1Q10571 1320 aaPredicted RBP12.03□□□□□ -0.48
GARNL3-220ENST00000496711 SPAG17Q6Q759 2223 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 TRDV1A0A1B0GX56 115 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 TTC36A6NLP5 189 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 RIIAD1A6NNX1 92 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 PRR23D1E9PI22 279 aaPredicted RBP12.03□□□□□ -0.48
GARNL3-220ENST00000496711 LMO7DNF2Z398 122 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 H0YIG0 161 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 PRR23D2P0DMB1 279 aaPredicted RBP12.03□□□□□ -0.48
GARNL3-220ENST00000496711 CT45A8P0DMV1 189 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 CT45A9P0DMV2 189 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 ATP12AP54707 1039 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 DEFA1P59665 94 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 DEFA3P59666 94 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 HNRNPKP61978 463 aaKnown RBP eCLIP12.03□□□□□ -0.48
GARNL3-220ENST00000496711 FOXK2Q01167 660 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 FABP5Q01469 135 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 RPL6Q02878 288 aaKnown RBP12.03□□□□□ -0.48
GARNL3-220ENST00000496711 FZD5Q13467 585 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 KRR1Q13601 381 aaKnown RBP12.03□□□□□ -0.48
GARNL3-220ENST00000496711 NNATQ16517 81 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 C14orf28Q4W4Y0 310 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 CT45A2Q5DJT8 189 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 ZNF322Q6U7Q0 402 aaPredicted RBP12.03□□□□□ -0.48
GARNL3-220ENST00000496711 TMPRSS11AQ6ZMR5 421 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 LAX1Q8IWV1 398 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 CADM3Q8N126 398 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 SLC43A2Q8N370 569 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 GALNT6Q8NCL4 622 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 OR51Q1Q8NH59 317 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 C16orf52Q8NHV5 167 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 SDHCQ99643 169 aaPredicted RBP12.03□□□□□ -0.48
GARNL3-220ENST00000496711 COQ7Q99807 217 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 OR10A5Q9H207 317 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 MED20Q9H944 212 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 OR10H1Q9Y4A9 318 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 V9GYH0 126 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 HEATR5AQ86XA9 2040 aa12.03□□□□□ -0.48
GARNL3-220ENST00000496711 SLC35F4A4IF30 521 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 FITM1A5D6W6 292 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 SYNDIG1LA6NDD5 238 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 SLC22A31A6NKX4 558 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 C12orf71A8MTZ7 269 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 LRRTM2O43300 516 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 PTP4A3O75365 173 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 DLGAP3O95886 979 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 IFNA16P05015 189 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 CLEC2LP0C7M8 214 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 ZNF3P17036 446 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 GALNSP34059 522 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 SDC2P34741 201 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 TGM4P49221 684 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 EPHA4P54764 986 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 NXPH1P58417 271 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 BDH1Q02338 343 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 SERTAD2Q14140 314 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 GRM7Q14831 915 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 ULK3Q6PHR2 472 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 GATAD2AQ86YP4 633 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 CADM2Q8N3J6 435 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 ACBD7Q8N6N7 88 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 BCORP1Q8N888 145 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 SYT14Q8NB59 555 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 OR51A7Q8NH64 312 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 HTRA1Q92743 480 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 KISS1RQ969F8 398 aaPredicted RBP12.02□□□□□ -0.48
GARNL3-220ENST00000496711 HCAR1Q9BXC0 346 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 RAB33BQ9H082 229 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 RPS6KB2Q9UBS0 482 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 PLEKHB1Q9UF11 243 aaPredicted RBP12.02□□□□□ -0.48
GARNL3-220ENST00000496711 SLC35A3Q9Y2D2 325 aa12.02□□□□□ -0.48
GARNL3-220ENST00000496711 TMEM184BQ9Y519 407 aaPredicted RBP12.02□□□□□ -0.48
GARNL3-220ENST00000496711 DNAH14Q0VDD8 3507 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 ADAMTS20P59510 1910 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 OR2W5A6NFC9 320 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 CCDC85CA6NKD9 419 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 SDC3O75056 442 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 PPP1R3DO95685 299 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 HLA-DPB1P04440 258 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 NGFRP08138 427 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 CELP19835 753 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 CD1CP29017 333 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 SLC6A6P31641 620 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 CRYZQ08257 329 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms