RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 CCR5P51681 352 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 CLDN6P56747 220 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 RAB38P57729 211 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 SLC3A1Q07837 685 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 TBCEQ15813 527 aaPredicted RBP11.03□□□□□ -0.64
HCN3-204ENST00000496230 ZNF404Q494X3 552 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 SPATC1Q76KD6 591 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 OR6K6Q8NGW6 343 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 C8orf44Q96CB5 159 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 CD180Q99467 661 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 NXF5Q9H1B4 397 aaKnown RBP11.03□□□□□ -0.64
HCN3-204ENST00000496230 TMEM27Q9HBJ8 222 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 GRIP1Q9Y3R0 1128 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 CDHR4A6H8M9 788 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 ZNF749O43361 778 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 SSX4O60224 188 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 NID1P14543 1247 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 HOXB6P17509 224 aaKnown RBP11.03□□□□□ -0.64
HCN3-204ENST00000496230 POU3F3P20264 500 aaPredicted RBP11.03□□□□□ -0.64
HCN3-204ENST00000496230 SDC2P34741 201 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 SH3BGRP55822 239 aaPredicted RBP11.03□□□□□ -0.64
HCN3-204ENST00000496230 C1DQ13901 141 aaKnown RBP11.03□□□□□ -0.64
HCN3-204ENST00000496230 RGS21Q2M5E4 152 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 SLC22A16Q86VW1 577 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 RFLNBQ8N5W9 214 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 POC5Q8NA72 575 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 OR1L3Q8NH93 324 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 GNPDA2Q8TDQ7 276 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 POP5Q969H6 163 aaKnown RBP11.03□□□□□ -0.64
HCN3-204ENST00000496230 ZNF524Q96C55 264 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 SARGQ9BW04 601 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 RTN4RQ9BZR6 473 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 IRF2BPLQ9H1B7 796 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 HMG20AQ9NP66 347 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 CUTCQ9NTM9 273 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 CALML5Q9NZT1 146 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 PTGFRNQ9P2B2 879 aa11.03□□□□□ -0.64
HCN3-204ENST00000496230 SVILO95425 2214 aa11.02□□□□□ -0.64
HCN3-204ENST00000496230 C11orf98E9PRG8 122 aa11.02□□□□□ -0.64
HCN3-204ENST00000496230 TFECO14948 347 aaPredicted RBP11.02□□□□□ -0.64
HCN3-204ENST00000496230 ATP1B1P05026 303 aa11.02□□□□□ -0.64
HCN3-204ENST00000496230 HOXC4P09017 264 aaPredicted RBP11.02□□□□□ -0.64
HCN3-204ENST00000496230 ENDOUP21128 410 aaKnown RBP11.02□□□□□ -0.64
HCN3-204ENST00000496230 PAICSP22234 425 aaKnown RBP11.02□□□□□ -0.64
HCN3-204ENST00000496230 PSMA1P25786 263 aaKnown RBP11.02□□□□□ -0.64
HCN3-204ENST00000496230 SNTA1Q13424 505 aa11.02□□□□□ -0.64
HCN3-204ENST00000496230 UBE2UQ5VVX9 321 aa11.02□□□□□ -0.64
HCN3-204ENST00000496230 FAM199XQ6PEV8 388 aaPredicted RBP11.02□□□□□ -0.64
HCN3-204ENST00000496230 KIRREL2Q6UWL6 708 aa11.02□□□□□ -0.64
HCN3-204ENST00000496230 CDK20Q8IZL9 346 aa11.02□□□□□ -0.64
HCN3-204ENST00000496230 SIRT6Q8N6T7 355 aa11.02□□□□□ -0.64
HCN3-204ENST00000496230 OR52E2Q8NGJ4 325 aa11.02□□□□□ -0.64
HCN3-204ENST00000496230 ZNF563Q8TA94 476 aa11.02□□□□□ -0.64
HCN3-204ENST00000496230 ASB12Q8WXK4 309 aa11.02□□□□□ -0.64
HCN3-204ENST00000496230 ERMAPQ96PL5 475 aaPredicted RBP11.02□□□□□ -0.64
HCN3-204ENST00000496230 CDADC1Q9BWV3 514 aa11.02□□□□□ -0.64
HCN3-204ENST00000496230 SLC2A4RGQ9NR83 387 aa11.02□□□□□ -0.64
HCN3-204ENST00000496230 GMEB2Q9UKD1 530 aa11.02□□□□□ -0.64
HCN3-204ENST00000496230 MRPS33Q9Y291 106 aaKnown RBP11.02□□□□□ -0.64
HCN3-204ENST00000496230 TRAPPC13A5PLN9 417 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 ANKRD61A6NGH8 418 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 C12orf71A8MTZ7 269 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 J3QLW9 94 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 ZNF701M0R085 212 aaPredicted RBP11.02□□□□□ -0.65
HCN3-204ENST00000496230 DOK2O60496 412 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 GPANK1O95872 356 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 ZNF19P17023 458 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 EFNA3P52797 238 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 EEF1A1P68104 462 aaKnown RBP11.02□□□□□ -0.65
HCN3-204ENST00000496230 TSPAN31Q12999 210 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 HNRNPA0Q13151 305 aaKnown RBP11.02□□□□□ -0.65
HCN3-204ENST00000496230 CD226Q15762 336 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 FHL5Q5TD97 284 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 ARHGAP40Q5TG30 622 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 ARL9Q6T311 187 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 TMEM99Q8N816 258 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 OR2T33Q8NG76 320 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 OR13C5Q8NGS8 318 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 MOAP1Q96BY2 351 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 FGF21Q9NSA1 209 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 ACAD8Q9UKU7 415 aa11.02□□□□□ -0.65
HCN3-204ENST00000496230 DSPP15924 2871 aaKnown RBP11.02□□□□□ -0.65
HCN3-204ENST00000496230 UNC119BA6NIH7 251 aa11.01□□□□□ -0.65
HCN3-204ENST00000496230 PIAS2O75928 621 aa11.01□□□□□ -0.65
HCN3-204ENST00000496230 OXSR1O95747 527 aaPredicted RBP11.01□□□□□ -0.65
HCN3-204ENST00000496230 SLC35E2P0CK97 266 aa11.01□□□□□ -0.65
HCN3-204ENST00000496230 AHCYP23526 432 aa11.01□□□□□ -0.65
HCN3-204ENST00000496230 BMP8BP34820 402 aa11.01□□□□□ -0.65
HCN3-204ENST00000496230 IFNGR2P38484 337 aa11.01□□□□□ -0.65
HCN3-204ENST00000496230 ERVK-25P63136 954 aa11.01□□□□□ -0.65
HCN3-204ENST00000496230 CRMP1Q14194 572 aa11.01□□□□□ -0.65
HCN3-204ENST00000496230 ELOAQ14241 798 aaKnown RBP11.01□□□□□ -0.65
HCN3-204ENST00000496230 C1QL3Q5VWW1 255 aa11.01□□□□□ -0.65
HCN3-204ENST00000496230 IL20RBQ6UXL0 311 aa11.01□□□□□ -0.65
HCN3-204ENST00000496230 APOOLQ6UXV4 268 aa11.01□□□□□ -0.65
HCN3-204ENST00000496230 CXXC5Q7LFL8 322 aaKnown RBP11.01□□□□□ -0.65
HCN3-204ENST00000496230 BMP8AQ7Z5Y6 402 aa11.01□□□□□ -0.65
HCN3-204ENST00000496230 OR52L1Q8NGH7 329 aa11.01□□□□□ -0.65
HCN3-204ENST00000496230 SPRYD4Q8WW59 207 aaPredicted RBP11.01□□□□□ -0.65
HCN3-204ENST00000496230 NKX3-1Q99801 234 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms