RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 BAG5Q9UL15 447 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 USP22Q9UPT9 525 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 OSGIN2Q9Y236 505 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 ZNF835Q9Y2P0 537 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 OR2M5A3KFT3 312 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 FIGNL2A6NMB9 653 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 CXCR6O00574 342 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 BCAS1O75363 584 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-235ENST00000495515 GCM2O75603 506 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-235ENST00000495515 OPN1SWP03999 348 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 PEPDP12955 493 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 GP1BBP13224 206 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 HSD17B1P14061 328 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 PRKCAP17252 672 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 POU3F2P20265 443 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-235ENST00000495515 ME2P23368 584 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 ELK4P28324 431 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 HTR1EP28566 365 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 HTR3AP46098 478 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 B3GALT5-AS1P59052 145 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 CRYZQ08257 329 aaKnown RBP15.48■□□□□ 0.07
HDAC6-235ENST00000495515 DMTNQ08495 405 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 EPS8Q12929 822 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 BCL2A1Q16548 175 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 TMEM44Q2T9K0 475 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 DNAL1Q4LDG9 190 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 LRRC23Q53EV4 343 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-235ENST00000495515 SLC25A53Q5H9E4 307 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 Q6ZPB1 254 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-235ENST00000495515 RINLQ6ZS11 566 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 FGD2Q7Z6J4 655 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 CHERPQ8IWX8 916 aaKnown RBP15.48■□□□□ 0.07
HDAC6-235ENST00000495515 SMYD1Q8NB12 490 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 LZICQ8WZA0 190 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 FIG4Q92562 907 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 TAMM41Q96BW9 452 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 TIMP4Q99727 224 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 SERINC1Q9NRX5 453 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 ACER3Q9NUN7 267 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 ADPRHL2Q9NX46 363 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 PRPF19Q9UMS4 504 aaKnown RBP15.48■□□□□ 0.07
HDAC6-235ENST00000495515 AP4B1Q9Y6B7 739 aa15.48■□□□□ 0.07
HDAC6-235ENST00000495515 TRGV8A0A0C4DH27 118 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 ETV2O00321 342 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-235ENST00000495515 GYG2O15488 501 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 STSP08842 583 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 HOXD4P09016 255 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-235ENST00000495515 PTGER4P35408 488 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 KCNJ5P48544 419 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 IDH2P48735 452 aaKnown RBP15.47■□□□□ 0.07
HDAC6-235ENST00000495515 RGS8P57771 180 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-235ENST00000495515 SESN3P58005 492 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 NCALDP61601 193 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 PLAURQ03405 335 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 FOXF1Q12946 379 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 TOMM34Q15785 309 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-235ENST00000495515 GXYLT1Q4G148 440 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 GRINAQ7Z429 371 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 CD163Q86VB7 1156 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 MEIOBQ8N635 442 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 RNF148Q8N7C7 305 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 OR5M1Q8NGP8 315 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 PRR7Q8TB68 274 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 PROX1Q92786 737 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 FAM162AQ96A26 154 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 RNF145Q96MT1 663 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 TP63Q9H3D4 680 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-235ENST00000495515 TAS2R1Q9NYW7 299 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 SLC9A8Q9Y2E8 581 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 ZNF337Q9Y3M9 751 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 CHST2Q9Y4C5 530 aa15.47■□□□□ 0.07
HDAC6-235ENST00000495515 RP1L1Q8IWN7 2480 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-235ENST00000495515 A0A1B0GUH1 482 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 GJE1A6NN92 205 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 H3BML4 177 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 TPST1O60507 370 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 WDR1O75083 606 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 LGI1O95970 557 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 GKN3PP0CG01 181 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 GABRA1P14867 456 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 CPN1P15169 458 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 GGT1P19440 569 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 TCN1P20061 433 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-235ENST00000495515 APOBEC1P41238 236 aaKnown RBP15.46■□□□□ 0.07
HDAC6-235ENST00000495515 SLC1A3P43003 542 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 UQCRFS1P47985 274 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 RAC1P63000 192 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 MERTKQ12866 999 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 BNIP1Q12981 228 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 DUSP7Q16829 419 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 EIF2S3LQ2VIR3 472 aaKnown RBP15.46■□□□□ 0.07
HDAC6-235ENST00000495515 CYBRD1Q53TN4 286 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 WBP2NLQ6ICG8 309 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 C6orf89Q6UWU4 347 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 RANBP3LQ86VV4 465 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-235ENST00000495515 KLHDC3Q9BQ90 382 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 PRDM14Q9GZV8 571 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 ALKBH4Q9NXW9 302 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 GMPR2Q9P2T1 348 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms