RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 CLOCKO15516 846 aa19.61■□□□□ 0.73
HDDC3-203ENST00000494993 ADAP00813 363 aa19.61■□□□□ 0.73
HDDC3-203ENST00000494993 CD3EP07766 207 aa19.61■□□□□ 0.73
HDDC3-203ENST00000494993 ENPP1P22413 925 aa19.61■□□□□ 0.73
HDDC3-203ENST00000494993 P2RY6Q15077 328 aa19.61■□□□□ 0.73
HDDC3-203ENST00000494993 SLC25A53Q5H9E4 307 aa19.61■□□□□ 0.73
HDDC3-203ENST00000494993 C6orf136Q5SQH8 315 aa19.61■□□□□ 0.73
HDDC3-203ENST00000494993 ZNF619Q8N2I2 560 aa19.61■□□□□ 0.73
HDDC3-203ENST00000494993 MOAP1Q96BY2 351 aa19.61■□□□□ 0.73
HDDC3-203ENST00000494993 ZNF524Q96C55 264 aa19.61■□□□□ 0.73
HDDC3-203ENST00000494993 COQ8BQ96D53 544 aa19.61■□□□□ 0.73
HDDC3-203ENST00000494993 C3orf30Q96M34 536 aa19.61■□□□□ 0.73
HDDC3-203ENST00000494993 SLC17A7Q9P2U7 560 aa19.61■□□□□ 0.73
HDDC3-203ENST00000494993 IGHV3-15A0A0B4J1V0 119 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 TLDC2A0PJX2 215 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 EIF4E2O60573 245 aaKnown RBP19.6■□□□□ 0.73
HDDC3-203ENST00000494993 SLU7O95391 586 aaKnown RBP19.6■□□□□ 0.73
HDDC3-203ENST00000494993 DANCRP0C864 163 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 SLC7A1P30825 629 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 RAC3P60763 192 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 ITGADQ13349 1161 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 IL23RQ5VWK5 629 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 ZCCHC23Q6ZST2 131 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 KRTCAP2Q8N6L1 136 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 TMCO5AQ8N6Q1 288 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 FNDC5Q8NAU1 212 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 TOR1AIP2Q8NFQ8 470 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 OR5W2Q8NH69 310 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 OR5AK3PQ8NH89 298 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 RFWD2Q8NHY2 731 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 TRMT61AQ96FX7 289 aaKnown RBP19.6■□□□□ 0.73
HDDC3-203ENST00000494993 OR7D2Q96RA2 312 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 PRPF18Q99633 342 aaKnown RBP19.6■□□□□ 0.73
HDDC3-203ENST00000494993 MDFIQ99750 246 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 USB1Q9BQ65 265 aaKnown RBP19.6■□□□□ 0.73
HDDC3-203ENST00000494993 PSD2Q9BQI7 771 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 POTEKPQ9BYX7 375 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 BCO1Q9HAY6 547 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 KLHL9Q9P2J3 617 aa19.6■□□□□ 0.73
HDDC3-203ENST00000494993 ING1Q9UK53 422 aaPredicted RBP19.6■□□□□ 0.73
HDDC3-203ENST00000494993 PLCE1Q9P212 2302 aa19.59■□□□□ 0.73
HDDC3-203ENST00000494993 ANK3Q12955 4377 aaKnown RBP19.59■□□□□ 0.73
HDDC3-203ENST00000494993 A0A1W2PNR3 127 aa19.59■□□□□ 0.73
HDDC3-203ENST00000494993 ZNF814B7Z6K7 855 aa19.59■□□□□ 0.73
HDDC3-203ENST00000494993 ETV2O00321 342 aaPredicted RBP19.59■□□□□ 0.73
HDDC3-203ENST00000494993 ZNF264O43296 627 aa19.59■□□□□ 0.73
HDDC3-203ENST00000494993 SKAP2O75563 359 aaPredicted RBP19.59■□□□□ 0.73
HDDC3-203ENST00000494993 SOD3P08294 240 aa19.59■□□□□ 0.73
HDDC3-203ENST00000494993 UBL4AP11441 157 aa19.59■□□□□ 0.73
HDDC3-203ENST00000494993 KRTAP1-1Q07627 177 aa19.59■□□□□ 0.73
HDDC3-203ENST00000494993 QPRTQ15274 297 aa19.59■□□□□ 0.73
HDDC3-203ENST00000494993 ETFDHQ16134 617 aa19.59■□□□□ 0.73
HDDC3-203ENST00000494993 CLEC12BQ2HXU8 276 aa19.59■□□□□ 0.73
HDDC3-203ENST00000494993 ZNF672Q499Z4 452 aaPredicted RBP19.59■□□□□ 0.73
HDDC3-203ENST00000494993 SEZ6L2Q6UXD5 910 aa19.59■□□□□ 0.73
HDDC3-203ENST00000494993 BHLHA15Q7RTS1 189 aaPredicted RBP19.59■□□□□ 0.73
HDDC3-203ENST00000494993 ATG4DQ86TL0 474 aaPredicted RBP19.59■□□□□ 0.73
HDDC3-203ENST00000494993 RIBC1Q8N443 379 aaPredicted RBP19.59■□□□□ 0.73
HDDC3-203ENST00000494993 OR5D16Q8NGK9 328 aa19.59■□□□□ 0.73
HDDC3-203ENST00000494993 NEUROG1Q92886 237 aa19.59■□□□□ 0.73
HDDC3-203ENST00000494993 SDF2Q99470 211 aa19.59■□□□□ 0.73
HDDC3-203ENST00000494993 BHLHE41Q9C0J9 482 aaPredicted RBP19.59■□□□□ 0.73
HDDC3-203ENST00000494993 L2HGDHQ9H9P8 463 aa19.59■□□□□ 0.73
HDDC3-203ENST00000494993 ESPNB1AK53 854 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 CFLARO15519 480 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 PRPS1L1P21108 318 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 ARRB2P32121 409 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 SERPINB5P36952 375 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 OR3A2P47893 321 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 CCR4P51679 360 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 CBFBQ13951 182 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 VEZF1Q14119 521 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 PDZK1Q5T2W1 519 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 C3orf33Q6P1S2 294 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 Q6ZT83 130 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 RIMKLAQ8IXN7 391 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 OR2W6PQ8NHA6 318 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 PIWIL2Q8TC59 973 aaKnown RBP19.58■□□□□ 0.72
HDDC3-203ENST00000494993 SMAP2Q8WU79 429 aaPredicted RBP19.58■□□□□ 0.72
HDDC3-203ENST00000494993 DUSP26Q9BV47 211 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 NMUR2Q9GZQ4 415 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 ZDHHC2Q9UIJ5 367 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 ADAM21Q9UKJ8 722 aa19.58■□□□□ 0.72
HDDC3-203ENST00000494993 SPAG7O75391 227 aa19.57■□□□□ 0.72
HDDC3-203ENST00000494993 SOAT1P35610 550 aa19.57■□□□□ 0.72
HDDC3-203ENST00000494993 CDKN1AP38936 164 aa19.57■□□□□ 0.72
HDDC3-203ENST00000494993 HBA1P69905 142 aa19.57■□□□□ 0.72
HDDC3-203ENST00000494993 BSPH1Q075Z2 132 aa19.57■□□□□ 0.72
HDDC3-203ENST00000494993 RASGEF1BQ0VAM2 473 aa19.57■□□□□ 0.72
HDDC3-203ENST00000494993 BHLHB9Q6PI77 547 aa19.57■□□□□ 0.72
HDDC3-203ENST00000494993 KBTBD8Q8NFY9 601 aa19.57■□□□□ 0.72
HDDC3-203ENST00000494993 TCP10LQ8TDR4 215 aa19.57■□□□□ 0.72
HDDC3-203ENST00000494993 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.57■□□□□ 0.72
HDDC3-203ENST00000494993 GTPBP3Q969Y2 492 aaKnown RBP19.57■□□□□ 0.72
HDDC3-203ENST00000494993 ARL8AQ96BM9 186 aa19.57■□□□□ 0.72
HDDC3-203ENST00000494993 PRSS50Q9UI38 385 aa19.57■□□□□ 0.72
HDDC3-203ENST00000494993 MAGED1Q9Y5V3 778 aaPredicted RBP19.57■□□□□ 0.72
HDDC3-203ENST00000494993 A0A1W2PP18 115 aa19.56■□□□□ 0.72
HDDC3-203ENST00000494993 DPRXA6NFQ7 191 aa19.56■□□□□ 0.72
HDDC3-203ENST00000494993 SERINC4A6NH21 518 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms