RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CAPRIN1Q14444 709 aaKnown RBP20.64■□□□□ 0.89
COL27A1-208ENST00000494780 IL23RQ5VWK5 629 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 BHLHB9Q6PI77 547 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 RIBC1Q8N443 379 aaPredicted RBP20.64■□□□□ 0.89
COL27A1-208ENST00000494780 ZNF614Q8N883 585 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 FNDC5Q8NAU1 212 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 TOR1AIP2Q8NFQ8 470 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 OR5W2Q8NH69 310 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 FBXW5Q969U6 566 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 C3orf30Q96M34 536 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 BHLHE41Q9C0J9 482 aaPredicted RBP20.64■□□□□ 0.89
COL27A1-208ENST00000494780 ANKZF1Q9H8Y5 726 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 L2HGDHQ9H9P8 463 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 BCO1Q9HAY6 547 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 KLHL9Q9P2J3 617 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 SLC17A7Q9P2U7 560 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 KIAA1324LA8MWY0 1029 aaPredicted RBP20.63■□□□□ 0.89
COL27A1-208ENST00000494780 OVOL3O00110 214 aa20.63■□□□□ 0.89
COL27A1-208ENST00000494780 CLOCKO15516 846 aa20.63■□□□□ 0.89
COL27A1-208ENST00000494780 ZNF264O43296 627 aa20.63■□□□□ 0.89
COL27A1-208ENST00000494780 PRPS1L1P21108 318 aa20.63■□□□□ 0.89
COL27A1-208ENST00000494780 ENPP1P22413 925 aa20.63■□□□□ 0.89
COL27A1-208ENST00000494780 SLC7A1P30825 629 aa20.63■□□□□ 0.89
COL27A1-208ENST00000494780 TNK1Q13470 666 aa20.63■□□□□ 0.89
COL27A1-208ENST00000494780 ETFDHQ16134 617 aa20.63■□□□□ 0.89
COL27A1-208ENST00000494780 NDUFAF6Q330K2 333 aa20.63■□□□□ 0.89
COL27A1-208ENST00000494780 RIMKLAQ8IXN7 391 aa20.63■□□□□ 0.89
COL27A1-208ENST00000494780 KRTCAP2Q8N6L1 136 aa20.63■□□□□ 0.89
COL27A1-208ENST00000494780 ARL8AQ96BM9 186 aa20.63■□□□□ 0.89
COL27A1-208ENST00000494780 TRMT61AQ96FX7 289 aaKnown RBP20.63■□□□□ 0.89
COL27A1-208ENST00000494780 OR7D2Q96RA2 312 aa20.63■□□□□ 0.89
COL27A1-208ENST00000494780 SDF2Q99470 211 aa20.63■□□□□ 0.89
COL27A1-208ENST00000494780 POTEKPQ9BYX7 375 aa20.63■□□□□ 0.89
COL27A1-208ENST00000494780 NMUR2Q9GZQ4 415 aa20.63■□□□□ 0.89
COL27A1-208ENST00000494780 ZNF814B7Z6K7 855 aa20.62■□□□□ 0.89
COL27A1-208ENST00000494780 CFLARO15519 480 aa20.62■□□□□ 0.89
COL27A1-208ENST00000494780 DANCRP0C864 163 aa20.62■□□□□ 0.89
COL27A1-208ENST00000494780 UBL4AP11441 157 aa20.62■□□□□ 0.89
COL27A1-208ENST00000494780 CBFBQ13951 182 aa20.62■□□□□ 0.89
COL27A1-208ENST00000494780 QPRTQ15274 297 aa20.62■□□□□ 0.89
COL27A1-208ENST00000494780 ZCCHC23Q6ZST2 131 aa20.62■□□□□ 0.89
COL27A1-208ENST00000494780 Q6ZT83 130 aa20.62■□□□□ 0.89
COL27A1-208ENST00000494780 ZNF619Q8N2I2 560 aa20.62■□□□□ 0.89
COL27A1-208ENST00000494780 TMCO5AQ8N6Q1 288 aa20.62■□□□□ 0.89
COL27A1-208ENST00000494780 RFWD2Q8NHY2 731 aa20.62■□□□□ 0.89
COL27A1-208ENST00000494780 PIWIL2Q8TC59 973 aaKnown RBP20.62■□□□□ 0.89
COL27A1-208ENST00000494780 ZNF524Q96C55 264 aa20.62■□□□□ 0.89
COL27A1-208ENST00000494780 PSD2Q9BQI7 771 aa20.62■□□□□ 0.89
COL27A1-208ENST00000494780 DUSP26Q9BV47 211 aa20.62■□□□□ 0.89
COL27A1-208ENST00000494780 ING1Q9UK53 422 aaPredicted RBP20.62■□□□□ 0.89
COL27A1-208ENST00000494780 IGHV3-15A0A0B4J1V0 119 aa20.61■□□□□ 0.89
COL27A1-208ENST00000494780 ESPNB1AK53 854 aa20.61■□□□□ 0.89
COL27A1-208ENST00000494780 AK1P00568 194 aa20.61■□□□□ 0.89
COL27A1-208ENST00000494780 SOD3P08294 240 aa20.61■□□□□ 0.89
COL27A1-208ENST00000494780 OR3A2P47893 321 aa20.61■□□□□ 0.89
COL27A1-208ENST00000494780 CCR4P51679 360 aa20.61■□□□□ 0.89
COL27A1-208ENST00000494780 HBA1P69905 142 aa20.61■□□□□ 0.89
COL27A1-208ENST00000494780 CLEC12BQ2HXU8 276 aa20.61■□□□□ 0.89
COL27A1-208ENST00000494780 ZNF672Q499Z4 452 aaPredicted RBP20.61■□□□□ 0.89
COL27A1-208ENST00000494780 DNAJC14Q6Y2X3 702 aaPredicted RBP20.61■□□□□ 0.89
COL27A1-208ENST00000494780 BHLHA15Q7RTS1 189 aaPredicted RBP20.61■□□□□ 0.89
COL27A1-208ENST00000494780 OR5D16Q8NGK9 328 aa20.61■□□□□ 0.89
COL27A1-208ENST00000494780 OR5AK3PQ8NH89 298 aa20.61■□□□□ 0.89
COL27A1-208ENST00000494780 OR2W6PQ8NHA6 318 aa20.61■□□□□ 0.89
COL27A1-208ENST00000494780 TCP10LQ8TDR4 215 aa20.61■□□□□ 0.89
COL27A1-208ENST00000494780 SMAP2Q8WU79 429 aaPredicted RBP20.61■□□□□ 0.89
COL27A1-208ENST00000494780 ZDHHC2Q9UIJ5 367 aa20.61■□□□□ 0.89
COL27A1-208ENST00000494780 FREM1Q5H8C1 2179 aa20.61■□□□□ 0.89
COL27A1-208ENST00000494780 DNHD1Q96M86 4753 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 A0A1W2PNR3 127 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 SERINC4A6NH21 518 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 DUXAA6NLW8 204 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 DNAJA2O60884 412 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 SPAG7O75391 227 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 SKAP2O75563 359 aaPredicted RBP20.6■□□□□ 0.89
COL27A1-208ENST00000494780 FESP07332 822 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 ARRB2P32121 409 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 IDUAP35475 653 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 SOAT1P35610 550 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 C21orf58P58505 322 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 RASGEF1BQ0VAM2 473 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 MAD2L1Q13257 205 aaPredicted RBP20.6■□□□□ 0.89
COL27A1-208ENST00000494780 PDZK1Q5T2W1 519 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 C3orf33Q6P1S2 294 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 SEZ6L2Q6UXD5 910 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 ST8SIA1Q92185 356 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 GTPBP3Q969Y2 492 aaKnown RBP20.6■□□□□ 0.89
COL27A1-208ENST00000494780 TUBGCP3Q96CW5 907 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 LAT2Q9GZY6 243 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 LGALS13Q9UHV8 139 aa20.6■□□□□ 0.89
COL27A1-208ENST00000494780 NUP214P35658 2090 aaPredicted RBP20.6■□□□□ 0.89
COL27A1-208ENST00000494780 ZNF724A8MTY0 619 aa20.59■□□□□ 0.89
COL27A1-208ENST00000494780 SMAD9O15198 467 aaKnown RBP20.59■□□□□ 0.89
COL27A1-208ENST00000494780 CYTIPO60759 359 aa20.59■□□□□ 0.89
COL27A1-208ENST00000494780 NUDT17P0C025 328 aa20.59■□□□□ 0.89
COL27A1-208ENST00000494780 MATN1P21941 496 aa20.59■□□□□ 0.89
COL27A1-208ENST00000494780 BSPH1Q075Z2 132 aa20.59■□□□□ 0.89
COL27A1-208ENST00000494780 SKP2Q13309 424 aa20.59■□□□□ 0.89
COL27A1-208ENST00000494780 VEZF1Q14119 521 aa20.59■□□□□ 0.89
COL27A1-208ENST00000494780 ZNF141Q15928 474 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms