RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, human

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VTI1A-208	ENST00000494728	ETV2	O00321	342 aa	Predicted RBP	10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	ZNF195	O14628	629 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	ADAM11	O75078	769 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	UGT2B17	O75795	530 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	SERPINE1	P05121	402 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	TUBB	P07437	444 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	ALDOC	P09972	364 aa	Known RBP	10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	UBL4A	P11441	157 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	BGN	P21810	368 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	ENPP1	P22413	925 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	EIF1	P41567	113 aa	Known RBP	10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	CCR4	P51679	360 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	SUMO3	P55854	103 aa	Predicted RBP	10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	ABCE1	P61221	599 aa	Known RBP	10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	QPRT	Q15274	297 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	GPR68	Q15743	365 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	LSM12	Q3MHD2	195 aa	Known RBP	10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	TMEM176B	Q3YBM2	270 aa	Predicted RBP	10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	TNFAIP8L3	Q5GJ75	292 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	SLC25A53	Q5H9E4	307 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	C6orf120	Q7Z4R8	191 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	WFDC8	Q8IUA0	241 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	TUSC5	Q8IXB3	177 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	GABRG1	Q8N1C3	465 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	ZNF527	Q8NB42	609 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	RAB3IL1	Q8TBN0	382 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	RAB8B	Q92930	207 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	S100PBP	Q96BU1	408 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	MOAP1	Q96BY2	351 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	COX4I2	Q96KJ9	171 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	TEX37	Q96LM6	180 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	ZNF350	Q9GZX5	532 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	OR51I1	Q9H343	314 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	PAQR5	Q9NXK6	330 aa	Predicted RBP	10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	NOP53	Q9NZM5	478 aa	Known RBP	10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	MKLN1	Q9UL63	735 aa		10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	FBN1	P35555	2871 aa	Known RBP	10.36	□□□□□ -0.75
VTI1A-208	ENST00000494728	ABCA1	O95477	2261 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	SERINC4	A6NH21	518 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	CLDN24	A6NM45	220 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	SMAD9	O15198	467 aa	Known RBP	10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	ZNF264	O43296	627 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	KIAA0513	O60268	411 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	DNAJA2	O60884	412 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	SMPD2	O60906	423 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	KRT16	P08779	473 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	INHBB	P09529	407 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	DDX5	P17844	614 aa	Known RBP	10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	PSMB1	P20618	241 aa	Known RBP	10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	MATN1	P21941	496 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	ADH6	P28332	368 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	CARD18	P57730	90 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	LTB	Q06643	244 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	SELENBP1	Q13228	472 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	ZNF141	Q15928	474 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	BEX5	Q5H9J7	111 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	SPANXN4	Q5MJ08	99 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	TYW3	Q6IPR3	259 aa	Known RBP	10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	HEPHL1	Q6MZM0	1159 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	ZNF704	Q6ZNC4	412 aa	Predicted RBP	10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	FCRLA	Q7L513	359 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	BIVM	Q86UB2	503 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	LRRC75A-AS1	Q8N1F1	130 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	ZNF619	Q8N2I2	560 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	FAM71C	Q8NEG0	241 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	OR8J2	Q8NGG1	315 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	OR5W2	Q8NH69	310 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	CPNE4	Q96A23	557 aa	Predicted RBP	10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	DNAJA3	Q96EY1	480 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	PLPPR2	Q96GM1	343 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	MRGPRX4	Q96LA9	322 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728		Q96MF0	132 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	ZNF300	Q96RE9	604 aa	Predicted RBP	10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	PIP5K1A	Q99755	562 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	PSD2	Q9BQI7	771 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	TMEM204	Q9BSN7	226 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	THUMPD3	Q9BV44	507 aa	Known RBP	10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	PARD6B	Q9BYG5	372 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	NUF2	Q9BZD4	464 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	NMUR2	Q9GZQ4	415 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	PNPO	Q9NVS9	261 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	STOML1	Q9UBI4	398 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	HAO1	Q9UJM8	370 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	RAP2C	Q9Y3L5	183 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	GPC6	Q9Y625	555 aa	Predicted RBP	10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	STAB1	Q9NY15	2570 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	ALPK2	Q86TB3	2170 aa		10.35	□□□□□ -0.75
VTI1A-208	ENST00000494728	UQCRHL	A0A096LP55	91 aa		10.34	□□□□□ -0.75
VTI1A-208	ENST00000494728	ZNF814	B7Z6K7	855 aa		10.34	□□□□□ -0.75
VTI1A-208	ENST00000494728		H7C1Q1	480 aa		10.34	□□□□□ -0.75
VTI1A-208	ENST00000494728	GTPBP1	O00178	669 aa	Known RBP	10.34	□□□□□ -0.75
VTI1A-208	ENST00000494728	RNASET2	O00584	256 aa	Known RBP	10.34	□□□□□ -0.75
VTI1A-208	ENST00000494728	BIRC5	O15392	142 aa		10.34	□□□□□ -0.75
VTI1A-208	ENST00000494728	RGS16	O15492	202 aa	Predicted RBP	10.34	□□□□□ -0.75
VTI1A-208	ENST00000494728	UBTFL6	P0CB48	400 aa	Predicted RBP	10.34	□□□□□ -0.75
VTI1A-208	ENST00000494728	OR12D1	P0DN82	309 aa		10.34	□□□□□ -0.75
VTI1A-208	ENST00000494728	SLC1A6	P48664	564 aa		10.34	□□□□□ -0.75
VTI1A-208	ENST00000494728	NME5	P56597	212 aa		10.34	□□□□□ -0.75

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