RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CCKARP32238 428 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 EIF1P41567 113 aaKnown RBP8.57□□□□□ -1.04
MSH5-218ENST00000494646 C21orf58P58505 322 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 UFM1P61960 85 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 BST1Q10588 318 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 FGFBP1Q14512 234 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 TSC22D1Q15714 1073 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 ARHGAP11BQ3KRB8 267 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 TNFAIP8L3Q5GJ75 292 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 SPANXN4Q5MJ08 99 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 GTF2IRD2BQ6EKJ0 949 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 TNFAIP8L2Q6P589 184 aaPredicted RBP8.57□□□□□ -1.04
MSH5-218ENST00000494646 BHLHB9Q6PI77 547 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 C16orf62Q7Z3J2 963 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 NUFIP2Q7Z417 695 aaKnown RBP8.57□□□□□ -1.04
MSH5-218ENST00000494646 GTF2IRD2Q86UP8 949 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 LSRQ86X29 649 aaPredicted RBP8.57□□□□□ -1.04
MSH5-218ENST00000494646 TUSC5Q8IXB3 177 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 WFDC11Q8NEX6 87 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 OR8J2Q8NGG1 315 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 OR6K3Q8NGY3 331 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 OR5W2Q8NH69 310 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 ZG16BQ96DA0 208 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 REXO5Q96IC2 774 aaKnown RBP8.57□□□□□ -1.04
MSH5-218ENST00000494646 TEX37Q96LM6 180 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 HS3ST6Q96QI5 342 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 ALPK1Q96QP1 1244 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 THUMPD3Q9BV44 507 aaKnown RBP8.57□□□□□ -1.04
MSH5-218ENST00000494646 QRSL1Q9H0R6 528 aaKnown RBP8.57□□□□□ -1.04
MSH5-218ENST00000494646 TIGARQ9NQ88 270 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 ASIC5Q9NY37 505 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 GOLGA8QA0A0J9YX86 632 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 CENPVL1A0A0U1RR11 272 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 GOLGA8OA6NCC3 632 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 ESPNB1AK53 854 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 GOLGA8NF8WBI6 632 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 ANKRD28O15084 1053 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 EIF4E2O60573 245 aaKnown RBP8.56□□□□□ -1.04
MSH5-218ENST00000494646 STX11O75558 287 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 UGT2B17O75795 530 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 PRKD3O94806 890 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 GOSR1O95249 250 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 CSTAP01040 98 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 UBTFL6P0CB48 400 aaPredicted RBP8.56□□□□□ -1.04
MSH5-218ENST00000494646 UBL4AP11441 157 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 PRKCAP17252 672 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 ENPP1P22413 925 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 ADH6P28332 368 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 CHI3L1P36222 383 aaPredicted RBP8.56□□□□□ -1.04
MSH5-218ENST00000494646 WDR4P57081 412 aaKnown RBP8.56□□□□□ -1.04
MSH5-218ENST00000494646 NKX6-1P78426 367 aaPredicted RBP8.56□□□□□ -1.04
MSH5-218ENST00000494646 CBFBQ13951 182 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 CASP8Q14790 479 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 QPRTQ15274 297 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 MAPK14Q16539 360 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 ACKR1Q16570 336 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 ZNF239Q16600 458 aaKnown RBP8.56□□□□□ -1.04
MSH5-218ENST00000494646 SWI5Q1ZZU3 235 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 TIGD2Q4W5G0 525 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 TMEM201Q5SNT2 666 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 ANXA8L1Q5VT79 327 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 STAC2Q6ZMT1 411 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 BEND4Q6ZU67 534 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 FCRLAQ7L513 359 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 WFDC8Q8IUA0 241 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 VPS37AQ8NEZ2 397 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 TOR1AIP2Q8NFQ8 470 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 ABHD3Q8WU67 409 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 DNAJA3Q96EY1 480 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 LAT2Q9GZY6 243 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 WDR55Q9H6Y2 383 aaPredicted RBP8.56□□□□□ -1.04
MSH5-218ENST00000494646 GLRX2Q9NS18 164 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 EXD2Q9NVH0 621 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 MARCOQ9UEW3 520 aaPredicted RBP8.56□□□□□ -1.04
MSH5-218ENST00000494646 ACTL7BQ9Y614 415 aa8.56□□□□□ -1.04
MSH5-218ENST00000494646 GPC6Q9Y625 555 aaPredicted RBP8.56□□□□□ -1.04
MSH5-218ENST00000494646 HEATR1Q9H583 2144 aaKnown RBP8.56□□□□□ -1.04
MSH5-218ENST00000494646 PRAMEF27A3QJZ7 478 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 SDHDO14521 159 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 KLF4O43474 513 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 PLAUP00749 431 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 GSNP06396 782 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 ALDOCP09972 364 aaKnown RBP8.55□□□□□ -1.04
MSH5-218ENST00000494646 PABPC4LP0CB38 370 aaKnown RBP8.55□□□□□ -1.04
MSH5-218ENST00000494646 LOXP28300 417 aaPredicted RBP8.55□□□□□ -1.04
MSH5-218ENST00000494646 EPHA3P29320 983 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 IL12AP29459 219 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 AGTR1P30556 359 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 SLC7A1P30825 629 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 HOXC12P31275 282 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 S100A3P33764 101 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 RYKP34925 604 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 PCYT1AP49585 367 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 CHRNEQ04844 493 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 ZNF141Q15928 474 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 FAM174BQ3ZCQ3 159 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 GPAT3Q53EU6 434 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 ATAD3BQ5T9A4 648 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 NXNQ6DKJ4 435 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 TYW3Q6IPR3 259 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms