RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 OPN3Q9H1Y3 402 aaPredicted RBP3.3□□□□□ -1.88
SMC4-224ENST00000494612 PNO1Q9NRX1 252 aaKnown RBP3.3□□□□□ -1.88
SMC4-224ENST00000494612 ZNF275Q9NSD4 429 aaPredicted RBP3.3□□□□□ -1.88
SMC4-224ENST00000494612 SLC35D1Q9NTN3 355 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 TMOD2Q9NZR1 351 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 CGNQ9P2M7 1197 aaKnown RBP3.3□□□□□ -1.88
SMC4-224ENST00000494612 B9D1Q9UPM9 204 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 PPIAL4AQ9Y536 164 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 CEP350Q5VT06 3117 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 CRYBG1Q9Y4K1 1723 aa3.3□□□□□ -1.88
SMC4-224ENST00000494612 PHRF1Q9P1Y6 1649 aaKnown RBP3.3□□□□□ -1.88
SMC4-224ENST00000494612 OVOS2A0A0G2JMS6 1433 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 OVOS2A0A0J9YW53 1432 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 OVOS2Q6IE36 1432 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 ANKARQ7Z5J8 1434 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 EIF3AQ14152 1382 aaKnown RBP3.29□□□□□ -1.88
SMC4-224ENST00000494612 LATO43561 262 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 PEX11AO75192 247 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 TM7SF2O76062 418 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 PGK1P00558 417 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 PCCBP05166 539 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 PTMAP06454 111 aaKnown RBP3.29□□□□□ -1.88
SMC4-224ENST00000494612 IGHV1-2P23083 117 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 IGFBP5P24593 272 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 OR3A4PP47883 348 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 RPL8P62917 257 aaKnown RBP3.29□□□□□ -1.88
SMC4-224ENST00000494612 CNTN2Q02246 1040 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 DCAF4L1Q3SXM0 396 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 TTC31Q49AM3 519 aaPredicted RBP3.29□□□□□ -1.88
SMC4-224ENST00000494612 LINC01620Q4KN68 170 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 TMEM41BQ5BJD5 291 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 CELF3Q5SZQ8 465 aaKnown RBP3.29□□□□□ -1.88
SMC4-224ENST00000494612 FAM120AOSQ5T036 256 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 NCR3LG1Q68D85 454 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 UFSP1Q6NVU6 142 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 LRRC8BQ6P9F7 803 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 TMEM184AQ6ZMB5 413 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 STAC2Q6ZMT1 411 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 Q6ZR54 194 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 ARMCX2Q7L311 632 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 LINC01561Q8N1V8 128 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 ARNTL2Q8WYA1 636 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 AKR1E2Q96JD6 320 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 PAK1IP1Q9NWT1 392 aaPredicted RBP3.29□□□□□ -1.88
SMC4-224ENST00000494612 SENP1Q9P0U3 644 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 CRLS1Q9UJA2 301 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 LAMP5Q9UJQ1 280 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 CLEC4EQ9ULY5 219 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 EIF3LQ9Y262 564 aaKnown RBP3.29□□□□□ -1.88
SMC4-224ENST00000494612 L3MBTL1Q9Y468 752 aa3.29□□□□□ -1.88
SMC4-224ENST00000494612 PARP4Q9UKK3 1724 aaKnown RBP3.29□□□□□ -1.88
SMC4-224ENST00000494612 SSH2Q76I76 1423 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 SBF2Q86WG5 1849 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 AKAP12Q02952 1782 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 DHX57Q6P158 1386 aaKnown RBP3.28□□□□□ -1.88
SMC4-224ENST00000494612 ANKRD30BQ9BXX2 1392 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 ITSN1Q15811 1721 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 SHANK3Q9BYB0 1731 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 FAM168BA1KXE4 195 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 MAPK13O15264 365 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 SCRG1O75711 98 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 IGKV3-15P01624 115 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 ASNSP08243 561 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 H2AFXP16104 143 aaPredicted RBP3.28□□□□□ -1.88
SMC4-224ENST00000494612 ATP6V1C1P21283 382 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 ATP5A1P25705 553 aaKnown RBP3.28□□□□□ -1.88
SMC4-224ENST00000494612 DHPSP49366 369 aaPredicted RBP3.28□□□□□ -1.88
SMC4-224ENST00000494612 BDH1Q02338 343 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 SLC15A2Q16348 729 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 RNF212Q495C1 297 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 PAMR1Q6UXH9 720 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 IFNEQ86WN2 208 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 ZNF677Q86XU0 584 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 ZNF584Q8IVC4 421 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 FBXO16Q8IX29 292 aaPredicted RBP3.28□□□□□ -1.88
SMC4-224ENST00000494612 C9orf40Q8IXQ3 194 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 FBXL16Q8N461 479 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 OR9A4Q8NGU2 314 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 PSMG2Q969U7 264 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 SLC25A38Q96DW6 304 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 TPPP3Q9BW30 176 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 COG4Q9H9E3 785 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 POLD4Q9HCU8 107 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 DPM3Q9P2X0 92 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 ANAPC7Q9UJX3 599 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 KIF3AQ9Y496 699 aa3.28□□□□□ -1.88
SMC4-224ENST00000494612 PIK3C2GO75747 1445 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 PEAK1Q9H792 1746 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 TOPAZ1Q8N9V7 1692 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 LRRC37A3O60309 1634 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 KLF18A0A0U1RQI7 1052 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 OR6C65A6NJZ3 312 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 H3BMQ9 156 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 OR1F1O43749 312 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 NUDT21O43809 227 aaKnown RBP3.27□□□□□ -1.89
SMC4-224ENST00000494612 RAMP1O60894 148 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 NEBLO76041 1014 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 B3GAT3O94766 335 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 F10P00742 488 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 CHRNA1P02708 482 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms