RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 ZNF83P51522 516 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 SELENBP1Q13228 472 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 TOMM34Q15785 309 aaPredicted RBP8.54□□□□□ -1.04
UBR4-216ENST00000494503 PGGHGQ32M88 737 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 RFTN2Q52LD8 501 aaPredicted RBP8.54□□□□□ -1.04
UBR4-216ENST00000494503 AGAP6Q5VW22 663 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 LIPMQ5VYY2 423 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 ZCCHC12Q6PEW1 402 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 MTERF4Q7Z6M4 381 aaKnown RBP8.54□□□□□ -1.04
UBR4-216ENST00000494503 TDRPQ86YL5 185 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 C10orf107Q8IVU9 208 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 PHC2Q8IXK0 858 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 SLC43A2Q8N370 569 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 TOR1AIP2Q8NFQ8 470 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 OR7A2PQ8NGA2 310 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 OR52N5Q8NH56 324 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 OR5AK3PQ8NH89 298 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 PIWIL2Q8TC59 973 aaKnown RBP8.54□□□□□ -1.04
UBR4-216ENST00000494503 TMEM158Q8WZ71 300 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 ADAD1Q96M93 576 aaKnown RBP8.54□□□□□ -1.04
UBR4-216ENST00000494503 ZNF300Q96RE9 604 aaPredicted RBP8.54□□□□□ -1.04
UBR4-216ENST00000494503 C1orf50Q9BV19 199 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 CACNG6Q9BXT2 260 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 TRIM2Q9C040 744 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 HOXD1Q9GZZ0 328 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 CXorf36Q9H7Y0 433 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 COQ10BQ9H8M1 238 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 ANKZF1Q9H8Y5 726 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 IGHV4-30-2A0A087WSY4 118 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 A0A1W2PR80 420 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 TMEM233B4DJY2 109 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 ZNF814B7Z6K7 855 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 M0R1B8 84 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 SCAMP2O15127 329 aaKnown RBP8.53□□□□□ -1.04
UBR4-216ENST00000494503 ZNF264O43296 627 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 GPRIN2O60269 458 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 PLIN3O60664 434 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 SOX30O94993 753 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 C6orf47O95873 294 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 KRT16P08779 473 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 FAM153BP0C7A2 387 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 PRKCAP17252 672 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 MAPK1P28482 360 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 LCN1P31025 176 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 RPL3P39023 403 aaKnown RBP8.53□□□□□ -1.04
UBR4-216ENST00000494503 MAP3K8P41279 467 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 CCT3P49368 545 aaKnown RBP8.53□□□□□ -1.04
UBR4-216ENST00000494503 SUMO3P55854 103 aaPredicted RBP8.53□□□□□ -1.04
UBR4-216ENST00000494503 DNAJB13P59910 316 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 RPS26P62854 115 aaKnown RBP8.53□□□□□ -1.04
UBR4-216ENST00000494503 CBFBQ13951 182 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 KIAA0040Q15053 153 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 QPRTQ15274 297 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 RAB35Q15286 201 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 GPR68Q15743 365 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 NRF1Q16656 503 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 FAM153CQ494X1 144 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 TIGD2Q4W5G0 525 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 C3orf33Q6P1S2 294 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 TMEM108Q6UXF1 575 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 Q6ZT83 130 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 HIPK1Q86Z02 1210 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 C4orf33Q8N1A6 199 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 FBXL14Q8N1E6 418 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 DEPDC4Q8N2C3 294 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 OR56A1Q8NGH5 318 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 OR5D16Q8NGK9 328 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 FAM110BQ8TC76 370 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 TWIST2Q8WVJ9 160 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 NANOS1Q8WY41 292 aaKnown RBP8.53□□□□□ -1.04
UBR4-216ENST00000494503 METTL2AQ96IZ6 378 aaKnown RBP8.53□□□□□ -1.04
UBR4-216ENST00000494503 MRGPRX4Q96LA9 322 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 KCNK17Q96T54 332 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 STACQ99469 402 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 USB1Q9BQ65 265 aaKnown RBP8.53□□□□□ -1.04
UBR4-216ENST00000494503 PSD2Q9BQI7 771 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 TRAF4Q9BUZ4 470 aaPredicted RBP8.53□□□□□ -1.04
UBR4-216ENST00000494503 BEX2Q9BXY8 128 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 ACTRT3Q9BYD9 372 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 QRSL1Q9H0R6 528 aaKnown RBP8.53□□□□□ -1.04
UBR4-216ENST00000494503 PIGUQ9H490 435 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 MANSC1Q9H8J5 431 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 L2HGDHQ9H9P8 463 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 DUSP22Q9NRW4 184 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 SERINC1Q9NRX5 453 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 ATAD3AQ9NVI7 634 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 OXSMQ9NWU1 459 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 GIMAP2Q9UG22 337 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 MID2Q9UJV3 735 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 TMED5Q9Y3A6 229 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 DTNAQ9Y4J8 743 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 CCL27Q9Y4X3 112 aa8.53□□□□□ -1.04
UBR4-216ENST00000494503 HAX1O00165 279 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 SULT2B1O00204 365 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 PIP5K1BO14986 540 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 LSM1O15116 133 aaKnown RBP8.52□□□□□ -1.05
UBR4-216ENST00000494503 PHF1O43189 567 aaPredicted RBP8.52□□□□□ -1.05
UBR4-216ENST00000494503 EFNA2O43921 213 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 PEX11AO75192 247 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 SKAP2O75563 359 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms