RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 PRR22Q8IZ63 422 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 ZNF441Q8N8Z8 693 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 SLC38A2Q96QD8 506 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 OR5M11Q96RB7 305 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 GFM1Q96RP9 751 aaKnown RBP15.18■□□□□ 0.02
ATG4B-225ENST00000494465 WWTR1Q9GZV5 400 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 UBQLN3Q9H347 655 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 TMEM5Q9Y2B1 443 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 CDC14CA4D256 554 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 KDM4EB2RXH2 506 aaPredicted RBP15.18■□□□□ 0.02
ATG4B-225ENST00000494465 D6RAR5 112 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 TO15178 435 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 CLPPQ16740 277 aaPredicted RBP15.18■□□□□ 0.02
ATG4B-225ENST00000494465 ZNF528Q3MIS6 628 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 PHF19Q5T6S3 580 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 CADM2Q8N3J6 435 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 GATSQ8NAP1 163 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 OR2T33Q8NG76 320 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 OR13C2Q8NGS9 318 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 TMEM80Q96HE8 168 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 ADOQ96SZ5 270 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 SIGLEC7Q9Y286 467 aa15.18■□□□□ 0.02
ATG4B-225ENST00000494465 IGHV3-20A0A0C4DH32 117 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 PRODHO43272 600 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 GDF9O60383 454 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 DCDP81605 110 aaKnown RBP15.17■□□□□ 0.02
ATG4B-225ENST00000494465 SKP2Q13309 424 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 FHL1Q13642 323 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 HSDL2Q6YN16 418 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 PPP1R3BQ86XI6 285 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 ZNF527Q8NB42 609 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 FANK1Q8TC84 345 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 RPL3LQ92901 407 aaKnown RBP15.17■□□□□ 0.02
ATG4B-225ENST00000494465 RTN4RQ9BZR6 473 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 TIMMDC1Q9NPL8 285 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 MRPS18AQ9NVS2 196 aaKnown RBP15.17■□□□□ 0.02
ATG4B-225ENST00000494465 COPS7AQ9UBW8 275 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 CLEC2DQ9UHP7 191 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 LSM2Q9Y333 95 aaKnown RBP15.17■□□□□ 0.02
ATG4B-225ENST00000494465 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-225ENST00000494465 VSTM2BA6NLU5 285 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 IDSB3KWA1 339 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 BHLHE40O14503 412 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 TSPAN2O60636 221 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 ICOSLGO75144 302 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 CNOT3O75175 753 aaKnown RBP15.17■□□□□ 0.02
ATG4B-225ENST00000494465 PTP4A3O75365 173 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 SLC2A10O95528 541 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 NR0B1P51843 470 aaKnown RBP15.17■□□□□ 0.02
ATG4B-225ENST00000494465 AADACL4Q5VUY2 407 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 RNLSQ5VYX0 342 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 TCEAL6Q6IPX3 200 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 LCN10Q6JVE6 187 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 THSD4Q6ZMP0 1018 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 ZNF367Q7RTV3 350 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 OVCH1Q7RTY7 1134 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 SLC46A3Q7Z3Q1 461 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 BMP8AQ7Z5Y6 402 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 ANKRD37Q7Z713 158 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 ANKK1Q8NFD2 765 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 OR52I1Q8NGK6 324 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 TCEAL3Q969E4 200 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 PRRG3Q9BZD7 231 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 MED17Q9NVC6 651 aa15.17■□□□□ 0.02
ATG4B-225ENST00000494465 COL27A1Q8IZC6 1860 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-225ENST00000494465 SYNDIG1LA6NDD5 238 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 OR6C76A6NM76 312 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 SCDO00767 359 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 CDK4P11802 303 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 CSTF2P33240 577 aaKnown RBP eCLIP15.16■□□□□ 0.02
ATG4B-225ENST00000494465 DUSP3P51452 185 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-225ENST00000494465 CBLN3Q6UW01 205 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 ZNF440Q8IYI8 595 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 NFAM1Q8NET5 270 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-225ENST00000494465 C3orf49Q96BT1 292 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 MPDZO75970 2070 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 A0A087WUJ7 227 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 UBL4AP11441 157 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 FGF5P12034 268 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 VBP1P61758 197 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 LSM3P62310 102 aaKnown RBP15.16■□□□□ 0.02
ATG4B-225ENST00000494465 ZFP36L1Q07352 338 aaKnown RBP15.16■□□□□ 0.02
ATG4B-225ENST00000494465 ARMCX4Q5H9R4 360 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 SLC29A4Q7RTT9 530 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 SLCO6A1Q86UG4 719 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 CDK20Q8IZL9 346 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 BMPERQ8N8U9 685 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 PHOSPHO1Q8TCT1 267 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 ZNF524Q96C55 264 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 LGALS12Q96DT0 336 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 CTRCQ99895 268 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 KLHDC3Q9BQ90 382 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 SEMA4CQ9C0C4 833 aa15.16■□□□□ 0.02
ATG4B-225ENST00000494465 EXOSC3Q9NQT5 275 aaKnown RBP15.16■□□□□ 0.02
ATG4B-225ENST00000494465 MRTO4Q9UKD2 239 aaKnown RBP15.16■□□□□ 0.02
ATG4B-225ENST00000494465 EXPH5Q8NEV8 1989 aa15.15■□□□□ 0.02
ATG4B-225ENST00000494465 TRAV27A0A087WT01 109 aa15.15■□□□□ 0.02
ATG4B-225ENST00000494465 EFCAB9A8MZ26 197 aa15.15■□□□□ 0.02
ATG4B-225ENST00000494465 SLC22A1O15245 554 aa15.15■□□□□ 0.02
ATG4B-225ENST00000494465 FOXD2O60548 495 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms