RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ZNF559Q9BR84 538 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 SLC38A1Q9H2H9 487 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 TMEM185BQ9H7F4 350 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 TPT1P8Q9HAU6 139 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 A0A0J9YW62 118 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 GJE1A6NN92 205 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 TNFSF11O14788 317 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 EDF1O60869 148 aaKnown RBP20.31■□□□□ 0.84
SNIP1-203ENST00000493916 UBTFL6P0CB48 400 aaPredicted RBP20.31■□□□□ 0.84
SNIP1-203ENST00000493916 KIR2DL3P43628 341 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 CCR4P51679 360 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 MYBPHQ13203 477 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 GUSBP1Q15486 140 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 GTDC1Q4AE62 458 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 C6orf10Q5SRN2 563 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 PDSS1Q5T2R2 415 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 BLOC1S3Q6QNY0 202 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 KIF18BQ86Y91 864 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 FUNDC1Q8IVP5 155 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 ST8SIA1Q92185 356 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 ZNF524Q96C55 264 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 ZG16BQ96DA0 208 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 SIKE1Q9BRV8 207 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 PAIP1Q9H074 479 aaKnown RBP20.31■□□□□ 0.84
SNIP1-203ENST00000493916 EXOSC3Q9NQT5 275 aaKnown RBP20.31■□□□□ 0.84
SNIP1-203ENST00000493916 P2RX2Q9UBL9 471 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 MCTS1Q9ULC4 181 aaKnown RBP20.31■□□□□ 0.84
SNIP1-203ENST00000493916 CSMD2Q7Z408 3487 aa20.31■□□□□ 0.84
SNIP1-203ENST00000493916 AGAP5A6NIR3 686 aa20.3■□□□□ 0.84
SNIP1-203ENST00000493916 EFNA2O43921 213 aa20.3■□□□□ 0.84
SNIP1-203ENST00000493916 AQP8O94778 261 aa20.3■□□□□ 0.84
SNIP1-203ENST00000493916 OPN1LWP04000 364 aa20.3■□□□□ 0.84
SNIP1-203ENST00000493916 HOXB9P17482 250 aaPredicted RBP20.3■□□□□ 0.84
SNIP1-203ENST00000493916 RPS4Y1P22090 263 aaKnown RBP20.3■□□□□ 0.84
SNIP1-203ENST00000493916 KIR2DL2P43627 348 aaPredicted RBP20.3■□□□□ 0.84
SNIP1-203ENST00000493916 SELENBP1Q13228 472 aa20.3■□□□□ 0.84
SNIP1-203ENST00000493916 SQLEQ14534 574 aa20.3■□□□□ 0.84
SNIP1-203ENST00000493916 HBMQ6B0K9 141 aa20.3■□□□□ 0.84
SNIP1-203ENST00000493916 SLC2A7Q6PXP3 512 aa20.3■□□□□ 0.84
SNIP1-203ENST00000493916 CMIPQ8IY22 773 aa20.3■□□□□ 0.84
SNIP1-203ENST00000493916 STARD4Q96DR4 205 aa20.3■□□□□ 0.84
SNIP1-203ENST00000493916 THUMPD3Q9BV44 507 aaKnown RBP20.3■□□□□ 0.84
SNIP1-203ENST00000493916 RBM24Q9BX46 236 aaKnown RBP20.3■□□□□ 0.84
SNIP1-203ENST00000493916 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.3■□□□□ 0.84
SNIP1-203ENST00000493916 THUMPD1Q9NXG2 353 aaKnown RBP20.3■□□□□ 0.84
SNIP1-203ENST00000493916 MED12LQ86YW9 2145 aa20.3■□□□□ 0.84
SNIP1-203ENST00000493916 A0A096LPI6 279 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 A8MXE2 369 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 MSTNO14793 375 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 CXCL13O43927 109 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 BCAS1O75363 584 aaPredicted RBP20.29■□□□□ 0.84
SNIP1-203ENST00000493916 CYP7B1O75881 506 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 NR2F1P10589 423 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 ETFAP13804 333 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 PGCP20142 388 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 SHC1P29353 583 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 CRATP43155 626 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 SLC6A8P48029 635 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 CPA2P48052 419 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 KCNJ10P78508 379 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 PLAURQ03405 335 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 MAPK11Q15759 364 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 VWA1Q6PCB0 445 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 LUZP2Q86TE4 346 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 CNEP1R1Q8N9A8 125 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 FAM222BQ8WU58 562 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 SPDL1Q96EA4 605 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 AURKBQ96GD4 344 aaPredicted RBP20.29■□□□□ 0.84
SNIP1-203ENST00000493916 QRSL1Q9H0R6 528 aaKnown RBP20.29■□□□□ 0.84
SNIP1-203ENST00000493916 MTHFD2LQ9H903 347 aaPredicted RBP20.29■□□□□ 0.84
SNIP1-203ENST00000493916 SLC52A3Q9NQ40 469 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 GALNT8Q9NY28 637 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 CRIM1Q9NZV1 1036 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 CCDC167Q9P0B6 97 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 PCDHB14Q9Y5E9 798 aa20.29■□□□□ 0.84
SNIP1-203ENST00000493916 ANKHD1Q8IWZ3 2542 aaKnown RBP20.29■□□□□ 0.84
SNIP1-203ENST00000493916 DSPPQ9NZW4 1301 aa20.28■□□□□ 0.84
SNIP1-203ENST00000493916 NR5A2O00482 541 aa20.28■□□□□ 0.84
SNIP1-203ENST00000493916 SYNGR4O95473 234 aa20.28■□□□□ 0.84
SNIP1-203ENST00000493916 CAPN3P20807 821 aa20.28■□□□□ 0.84
SNIP1-203ENST00000493916 SFTPDP35247 375 aa20.28■□□□□ 0.84
SNIP1-203ENST00000493916 PCYT1AP49585 367 aa20.28■□□□□ 0.84
SNIP1-203ENST00000493916 DSTNP60981 165 aa20.28■□□□□ 0.84
SNIP1-203ENST00000493916 SNTB1Q13884 538 aaKnown RBP20.28■□□□□ 0.84
SNIP1-203ENST00000493916 LRIF1Q5T3J3 769 aa20.28■□□□□ 0.84
SNIP1-203ENST00000493916 TMEM234Q8WY98 164 aa20.28■□□□□ 0.84
SNIP1-203ENST00000493916 PRRG4Q9BZD6 226 aa20.28■□□□□ 0.84
SNIP1-203ENST00000493916 TIGARQ9NQ88 270 aa20.28■□□□□ 0.84
SNIP1-203ENST00000493916 ACER3Q9NUN7 267 aa20.28■□□□□ 0.84
SNIP1-203ENST00000493916 CALML5Q9NZT1 146 aa20.28■□□□□ 0.84
SNIP1-203ENST00000493916 DBIP07108 87 aaKnown RBP20.27■□□□□ 0.84
SNIP1-203ENST00000493916 NID1P14543 1247 aa20.27■□□□□ 0.84
SNIP1-203ENST00000493916 CARD18P57730 90 aa20.27■□□□□ 0.84
SNIP1-203ENST00000493916 SESN3P58005 492 aa20.27■□□□□ 0.84
SNIP1-203ENST00000493916 KRTAP10-9P60411 292 aa20.27■□□□□ 0.84
SNIP1-203ENST00000493916 GNA13Q14344 377 aa20.27■□□□□ 0.84
SNIP1-203ENST00000493916 C3orf33Q6P1S2 294 aa20.27■□□□□ 0.84
SNIP1-203ENST00000493916 FAM214BQ7L5A3 538 aa20.27■□□□□ 0.84
SNIP1-203ENST00000493916 BTLAQ7Z6A9 289 aa20.27■□□□□ 0.84
SNIP1-203ENST00000493916 HMGN2P46Q86SG4 172 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms