RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 ENKD1Q9H0I2 346 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 OR51B6Q9H340 312 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 ANKRD19PQ9H560 264 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 PTTG3PQ9NZH4 202 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SALL4Q9UJQ4 1053 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 INSL6Q9Y581 213 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 PCDHA9Q9Y5H5 950 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 A0A0B4J2A0 478 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 KRBA1A5PL33 1030 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 RNGTTO60942 597 aaKnown RBP7.41□□□□□ -1.22
BRCA1-221ENST00000493795 DHRS4L1P0CG22 281 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 FGF3P11487 239 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-221ENST00000493795 MAKP20794 623 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 HOXD12P35452 270 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 TAGLN2P37802 199 aaKnown RBP7.41□□□□□ -1.22
BRCA1-221ENST00000493795 TGM4P49221 684 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 MAP4K2Q12851 820 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 TNK1Q13470 666 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 DGKZQ13574 1117 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 ADIRFQ15847 76 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 ZNF574Q6ZN55 896 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-221ENST00000493795 OR1M1Q8NGA1 313 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 ARSGQ96EG1 525 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 FCRL1Q96LA6 429 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 MYADMQ96S97 322 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 NMNAT1Q9HAN9 279 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-221ENST00000493795 GNB4Q9HAV0 340 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 MTCH1Q9NZJ7 389 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SHPKQ9UHJ6 478 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SSUH2Q9Y2M2 353 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 TMEM88BA6NKF7 163 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SDHDO14521 159 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 MITFO75030 526 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-221ENST00000493795 DFFBO76075 338 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 VNN1O95497 513 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SFTPDP35247 375 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 GSCP56915 257 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-221ENST00000493795 RAC1P63000 192 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SHC2P98077 582 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 GRM2Q14416 872 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SLC22A6Q4U2R8 563 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 OR10K2Q6IF99 312 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 CPNE8Q86YQ8 564 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 TMEM139Q8IV31 216 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 TCTE3Q8IZS6 198 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 C1orf87Q8N0U7 546 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SLC5A8Q8N695 610 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 KDM1BQ8NB78 822 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 PRR11Q96HE9 360 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-221ENST00000493795 MS4A4EQ96PG1 132 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SGPP1Q9BX95 441 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 DZANK1Q9NVP4 752 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 ZDHHC7Q9NXF8 308 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 OR14J1Q9UGF5 321 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 GAB2Q9UQC2 676 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 hCG_1809904A0A1W2PP81 198 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 A0A1W2PPE2 198 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 A0A1W2PR64 198 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 A0A1W2PRV1 198 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 MEIOCA2RUB1 952 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 CDHR4A6H8M9 788 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 H3BMQ9 156 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 TUSC2O75896 110 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 POU3F2P20265 443 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-221ENST00000493795 GIFP27352 417 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 GMPRP36959 345 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 ETV3P41162 512 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 XCR1P46094 333 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 HTR3AP46098 478 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 GALNT1Q10472 559 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-221ENST00000493795 KEAP1Q14145 624 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 ACSM3Q53FZ2 586 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SOHLH1Q5JUK2 328 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 CNKSR3Q6P9H4 555 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 DPPA2Q7Z7J5 298 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 CPOQ8IVL8 374 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 CCDC74AQ96AQ1 378 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 REEP6Q96HR9 211 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 KAZALD1Q96I82 304 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 CCDC74BQ96LY2 380 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 FAM234AQ9H0X4 552 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 LIN7BQ9HAP6 207 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 INPP5EQ9NRR6 644 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SLC35D1Q9NTN3 355 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 OLAHQ9NV23 265 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 CXXC1Q9P0U4 656 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-221ENST00000493795 HHLA2Q9UM44 414 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 PCDHAC2Q9Y5I4 1007 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 CLDN1O95832 211 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 FOLR3P41439 243 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 CLDN8P56748 225 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 C19orf35Q6ZS72 473 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 DEFB132Q7Z7B7 95 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 TMEM200AQ86VY9 491 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 IRF2BP1Q8IU81 584 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 BPIFB2Q8N4F0 458 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 OR1S2Q8NGQ3 325 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SERINC2Q96SA4 455 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 HERPUD2Q9BSE4 406 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SAP130Q9H0E3 1048 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms