RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 TUBA8Q9NY65 449 aaPredicted RBP11.32□□□□□ -0.6
SNX17-208ENST00000493711 RPS6KB2Q9UBS0 482 aa11.32□□□□□ -0.6
SNX17-208ENST00000493711 FAM32AQ9Y421 112 aaKnown RBP11.32□□□□□ -0.6
SNX17-208ENST00000493711 C7orf72A4D263 438 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 CLDN24A6NM45 220 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 TMEM229AB2RXF0 380 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 G3V3Y1 287 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 LINC01387J3KSC0 135 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 GNB5O14775 395 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 GLSO94925 669 aaPredicted RBP11.31□□□□□ -0.6
SNX17-208ENST00000493711 FABP3P05413 133 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 THRBP10828 461 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 GP1BBP13224 206 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 FKBP2P26885 142 aaKnown RBP11.31□□□□□ -0.6
SNX17-208ENST00000493711 ADH6P28332 368 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 SRD5A2P31213 254 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 CCR4P51679 360 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 MAP2K6P52564 334 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 SMIM11AP58511 58 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 GPR85P60893 370 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 KLRB1Q12918 225 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 SLC6A19Q695T7 634 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 WBP2NLQ6ICG8 309 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 ENPP6Q6UWR7 440 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 PIWIL3Q7Z3Z3 882 aaKnown RBP11.31□□□□□ -0.6
SNX17-208ENST00000493711 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.31□□□□□ -0.6
SNX17-208ENST00000493711 LSMEM1Q8N8F7 131 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 EXD3Q8N9H8 876 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 ZNF563Q8TA94 476 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 GPR119Q8TDV5 335 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 DNAJA4Q8WW22 397 aaPredicted RBP11.31□□□□□ -0.6
SNX17-208ENST00000493711 ZBTB8AQ96BR9 441 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 C1GALT1C1Q96EU7 318 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 UBL7Q96S82 380 aaPredicted RBP11.31□□□□□ -0.6
SNX17-208ENST00000493711 TTTY12Q9BZ98 90 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 RTN4RQ9BZR6 473 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 IL1RAPQ9NPH3 570 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 ZNF71Q9NQZ8 489 aaPredicted RBP11.31□□□□□ -0.6
SNX17-208ENST00000493711 CCM2LQ9NUG4 571 aaPredicted RBP11.31□□□□□ -0.6
SNX17-208ENST00000493711 SELENONQ9NZV5 590 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 MED11Q9P086 117 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 STOML1Q9UBI4 398 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 DKKL1Q9UK85 242 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 CHST2Q9Y4C5 530 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 ENPP4Q9Y6X5 453 aa11.31□□□□□ -0.6
SNX17-208ENST00000493711 LRRC3CA6NJW4 275 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 K7EM74 188 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 ETV2O00321 342 aaPredicted RBP11.3□□□□□ -0.6
SNX17-208ENST00000493711 EPPINO95925 133 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 SEMG1P04279 462 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 ZNF24P17028 368 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 RHCEP18577 417 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 DPP4P27487 766 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 GDF1P27539 372 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 SLC7A1P30825 629 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 ACAA2P42765 397 aaKnown RBP11.3□□□□□ -0.6
SNX17-208ENST00000493711 SLC1A3P43003 542 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 CD97P48960 835 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 ZNF136P52737 540 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 DLX5P56178 289 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 PPIAP62937 165 aaKnown RBP11.3□□□□□ -0.6
SNX17-208ENST00000493711 CCNIQ14094 377 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 GK3PQ14409 553 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 KPNB1Q14974 876 aaKnown RBP11.3□□□□□ -0.6
SNX17-208ENST00000493711 GLIPR1L2Q4G1C9 344 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 SLC25A53Q5H9E4 307 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 OR5M10Q6IEU7 315 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 ZNF613Q6PF04 617 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 CBLN3Q6UW01 205 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 VTCN1Q7Z7D3 282 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 ADGRG5Q8IZF4 528 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 FAM109AQ8N4B1 249 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 PAPD5Q8NDF8 572 aaKnown RBP11.3□□□□□ -0.6
SNX17-208ENST00000493711 OR6T1Q8NGN1 323 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 VANGL1Q8TAA9 524 aaPredicted RBP11.3□□□□□ -0.6
SNX17-208ENST00000493711 STMN2Q93045 179 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 C7orf34Q96L11 122 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 MRGPRX4Q96LA9 322 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 GNRHR2Q96P88 292 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 SEPHS2Q99611 448 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 MCHR1Q99705 422 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 HES7Q9BYE0 225 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 DENND2DQ9H6A0 471 aaPredicted RBP11.3□□□□□ -0.6
SNX17-208ENST00000493711 C12orf10Q9HB07 376 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 ACER3Q9NUN7 267 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 TAS2R10Q9NYW0 307 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 AURKCQ9UQB9 309 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 CSAG2Q9Y5P2 127 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 PTPRQQ9UMZ3 2332 aa11.3□□□□□ -0.6
SNX17-208ENST00000493711 TENM4Q6N022 2769 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 A0A0G2JMM0 328 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 A0A1W2PPB8 328 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 A0A1W2PRS3 328 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 TRAPPC13A5PLN9 417 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 CYSRT1A8MQ03 144 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 KIR3DP1A8MWS1 328 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 M0R3H8 397 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 HNRNPRO43390 633 aaKnown RBP11.29□□□□□ -0.6
SNX17-208ENST00000493711 OIP5O43482 229 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 CDC40O60508 579 aaKnown RBP eCLIP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms