RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	LCA5	Q86VQ0	697 aa		12.08	□□□□□ -0.48
SAMM50-204	ENST00000493161	SLC43A2	Q8N370	569 aa		12.08	□□□□□ -0.48
SAMM50-204	ENST00000493161	ELOA3	Q8NG57	546 aa		12.08	□□□□□ -0.48
SAMM50-204	ENST00000493161	RFWD2	Q8NHY2	731 aa		12.08	□□□□□ -0.48
SAMM50-204	ENST00000493161	ZFP28	Q8NHY6	868 aa		12.08	□□□□□ -0.48
SAMM50-204	ENST00000493161	MZB1	Q8WU39	189 aa		12.08	□□□□□ -0.48
SAMM50-204	ENST00000493161	CHMP6	Q96FZ7	201 aa		12.08	□□□□□ -0.48
SAMM50-204	ENST00000493161	ZNF764	Q96H86	408 aa	Predicted RBP	12.08	□□□□□ -0.48
SAMM50-204	ENST00000493161	FCRL1	Q96LA6	429 aa		12.08	□□□□□ -0.48
SAMM50-204	ENST00000493161	CCT7	Q99832	543 aa		12.08	□□□□□ -0.48
SAMM50-204	ENST00000493161	QRSL1	Q9H0R6	528 aa	Known RBP	12.08	□□□□□ -0.48
SAMM50-204	ENST00000493161	ACSS1	Q9NUB1	689 aa	Predicted RBP	12.08	□□□□□ -0.48
SAMM50-204	ENST00000493161	FAIM	Q9NVQ4	179 aa		12.08	□□□□□ -0.48
SAMM50-204	ENST00000493161	C1orf109	Q9NX04	203 aa		12.08	□□□□□ -0.48
SAMM50-204	ENST00000493161	ACTL7B	Q9Y614	415 aa		12.08	□□□□□ -0.48
SAMM50-204	ENST00000493161	GPC6	Q9Y625	555 aa	Predicted RBP	12.08	□□□□□ -0.48
SAMM50-204	ENST00000493161	GOLGA8Q	A0A0J9YX86	632 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161		A0A1W2PPM1	405 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	GOLGA8O	A6NCC3	632 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	ESPN	B1AK53	854 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	GOLGA8N	F8WBI6	632 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	CYTIP	O60759	359 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	LY6H	O94772	140 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	GSTA1	P08263	222 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	IGHV4-31	P0DP07	118 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	MYL2	P10916	166 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	ZNF16	P17020	682 aa	Predicted RBP	12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	GGT1	P19440	569 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	COX5A	P20674	150 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	ZNF83	P51522	516 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	CASP9	P55211	416 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	RAC3	P60763	192 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	CKAP4	Q07065	602 aa	Known RBP	12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	TIMM23B	Q5SRD1	257 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	CDC73	Q6P1J9	531 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	IL17REL	Q6ZVW7	336 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	MTERF4	Q7Z6M4	381 aa	Known RBP	12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	ZNF433	Q8N7K0	673 aa	Predicted RBP	12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	OR52N5	Q8NH56	324 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	MUCL1	Q96DR8	90 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	ADAD1	Q96M93	576 aa	Known RBP	12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	USB1	Q9BQ65	265 aa	Known RBP	12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	C19orf24	Q9BVV8	132 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	TSPYL1	Q9H0U9	437 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	TUBB1	Q9H4B7	451 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	CBLN4	Q9NTU7	201 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	ZCCHC3	Q9NUD5	404 aa	Known RBP	12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	KLHL9	Q9P2J3	617 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	FIS1	Q9Y3D6	152 aa		12.07	□□□□□ -0.48
SAMM50-204	ENST00000493161	OR5H1	A6NKK0	313 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	NPIPB9	F8W1W9	429 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	KIF2A	O00139	706 aa	Predicted RBP	12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	GTPBP1	O00178	669 aa	Known RBP	12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	RAD51D	O75771	328 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	PROC	P04070	461 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	LINC00032	P0C843	101 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	UROS	P10746	265 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	SLC7A1	P30825	629 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	NTF4	P34130	210 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	FOXG1	P55316	489 aa	Predicted RBP	12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	RPL38	P63173	70 aa	Known RBP	12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	CHRNE	Q04844	493 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	SELENBP1	Q13228	472 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	QPRT	Q15274	297 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	SLC25A53	Q5H9E4	307 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	DCST2	Q5T1A1	773 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	ZCCHC12	Q6PEW1	402 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	SLC22A25	Q6T423	547 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	ZNF100	Q8IYN0	542 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	MUC15	Q8N387	334 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	ZNF614	Q8N883	585 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	ACMSD	Q8TDX5	336 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	C10orf105	Q8TEF2	133 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	MRGPRX4	Q96LA9	322 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	OR5B2	Q96R09	309 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	STAC	Q99469	402 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	DHRS9	Q9BPW9	319 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	C1QTNF6	Q9BXI9	259 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	PIGU	Q9H490	435 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	L2HGDH	Q9H9P8	463 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	DUSP22	Q9NRW4	184 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	TMEM160	Q9NX00	188 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	TBK1	Q9UHD2	729 aa		12.06	□□□□□ -0.48
SAMM50-204	ENST00000493161	SVEP1	Q4LDE5	3571 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	SLC35F4	A4IF30	521 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	ZNF724	A8MTY0	619 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	SLC28A1	O00337	649 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	ABHD2	P08910	425 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	ATP6V1C1	P21283	382 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	IGFBP5	P24593	272 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	CD40	P25942	277 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	FABP6	P51161	128 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	ATP12A	P54707	1039 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	SUMO3	P55854	103 aa	Predicted RBP	12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	DSCR9	P59020	149 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	RAB35	Q15286	201 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	TIGD2	Q4W5G0	525 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	ARL13A	Q5H913	290 aa	Predicted RBP	12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	CYB5R2	Q6BCY4	276 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	OLIG3	Q7RTU3	272 aa		12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms