RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 PFN4Q8NHR9 129 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 GRHL3Q8TE85 626 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 DNAJA4Q8WW22 397 aaPredicted RBP12.91□□□□□ -0.34
PTPN7-216ENST00000492977 HSPBAP1Q96EW2 488 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 TMEM80Q96HE8 168 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 LMF1Q96S06 567 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 CCNL2Q96S94 520 aaPredicted RBP12.91□□□□□ -0.34
PTPN7-216ENST00000492977 DPH1Q9BZG8 443 aa12.91□□□□□ -0.34
PTPN7-216ENST00000492977 EXOSC3Q9NQT5 275 aaKnown RBP12.91□□□□□ -0.34
PTPN7-216ENST00000492977 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTPN7-216ENST00000492977 D6RAR5 112 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 SURF4O15260 269 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 PRODHO43272 600 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 HEXBP07686 556 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 FGF5P12034 268 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 CSTF2P33240 577 aaKnown RBP eCLIP12.9□□□□□ -0.34
PTPN7-216ENST00000492977 GPR143P51810 404 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 COPZ1P61923 177 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 TIGD6Q17RP2 521 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 KLHL22Q53GT1 634 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 CLEC12AQ5QGZ9 265 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 ZNF385CQ66K41 422 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-216ENST00000492977 OR52L1Q8NGH7 329 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 OR4Q3Q8NH05 313 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 PLEKHA8Q96JA3 519 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 SAMD8Q96LT4 415 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 GAL3ST4Q96RP7 486 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 DCUN1D5Q9BTE7 237 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 WWTR1Q9GZV5 400 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 UBQLN3Q9H347 655 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 ATP13A2Q9NQ11 1180 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 MEPEQ9NQ76 525 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-216ENST00000492977 C20orf141Q9NUB4 165 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 MRPS18AQ9NVS2 196 aaKnown RBP12.9□□□□□ -0.34
PTPN7-216ENST00000492977 ZDBF2Q9HCK1 2354 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 ASCC3Q8N3C0 2202 aaKnown RBP12.9□□□□□ -0.34
PTPN7-216ENST00000492977 USP34Q70CQ2 3546 aa12.9□□□□□ -0.34
PTPN7-216ENST00000492977 VSTM2BA6NLU5 285 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 EFCAB9A8MZ26 197 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 KDM4EB2RXH2 506 aaPredicted RBP12.9□□□□□ -0.35
PTPN7-216ENST00000492977 IDSB3KWA1 339 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 M0R082 166 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 SLC22A1O15245 554 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 REM1O75628 298 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 BCL10O95999 233 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 PTHP01270 115 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 UBL4AP11441 157 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 CD36P16671 472 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 BMP7P18075 431 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 SLC30A6Q6NXT4 461 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 KIRREL2Q6UWL6 708 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 LANCL3Q6ZV70 420 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 BCDIN3DQ7Z5W3 292 aaKnown RBP12.9□□□□□ -0.35
PTPN7-216ENST00000492977 SLC34A3Q8N130 599 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 SLC43A2Q8N370 569 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 CADM2Q8N3J6 435 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 ZNF441Q8N8Z8 693 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 ANKK1Q8NFD2 765 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 FANK1Q8TC84 345 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 RFKQ969G6 155 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 LOXL4Q96JB6 756 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 UCN2Q96RP3 112 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 RACGAP1Q9H0H5 632 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 OR52D1Q9H346 318 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 HHATLQ9HCP6 504 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 ERGIC3Q9Y282 383 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 PCDHGB2Q9Y5G2 931 aa12.9□□□□□ -0.35
PTPN7-216ENST00000492977 A0A087WUJ7 227 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 HTR3EA5X5Y0 456 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 GTPBP1O00178 669 aaKnown RBP12.89□□□□□ -0.35
PTPN7-216ENST00000492977 KPNA4O00629 521 aaPredicted RBP12.89□□□□□ -0.35
PTPN7-216ENST00000492977 PRKNO60260 465 aaPredicted RBP12.89□□□□□ -0.35
PTPN7-216ENST00000492977 TSPAN2O60636 221 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 HCN1O60741 890 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 ALOX12BO75342 701 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 PTP4A3O75365 173 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 GP1BAP07359 652 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 NGFRP08138 427 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 CYC1P08574 325 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 ENDOUP21128 410 aaKnown RBP12.89□□□□□ -0.35
PTPN7-216ENST00000492977 PTNP21246 168 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 IL12BP29460 328 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 GRK5P34947 590 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 TGFBR2P37173 567 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 GRK6P43250 576 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 NR0B1P51843 470 aaKnown RBP12.89□□□□□ -0.35
PTPN7-216ENST00000492977 PNLIPRP2P54317 469 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 ZFP36L1Q07352 338 aaKnown RBP12.89□□□□□ -0.35
PTPN7-216ENST00000492977 DBX2Q6ZNG2 339 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 SHISA6Q6ZSJ9 500 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 ANKRD37Q7Z713 158 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 AGBL5Q8NDL9 886 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 PHOSPHO1Q8TCT1 267 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 METTL21AQ8WXB1 218 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 TP53INP1Q96A56 240 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 ADOQ96SZ5 270 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 SEMA4CQ9C0C4 833 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 SLC26A1Q9H2B4 701 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 OCIAD1Q9NX40 245 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 PPIEQ9UNP9 301 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms