RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	NID1	P14543	1247 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	BGN	P21810	368 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	IL32	P24001	234 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	PCSK6	P29122	969 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	ATP12A	P54707	1039 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	ATP5J2	P56134	94 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	SELENBP1	Q13228	472 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	PTGR1	Q14914	329 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	TTMP	Q5BVD1	217 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	HHAT	Q5VTY9	493 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	ALKBH2	Q6NS38	261 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	CBLN3	Q6UW01	205 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	FCRLA	Q7L513	359 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	TUSC5	Q8IXB3	177 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	TMCO5A	Q8N6Q1	288 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	ZNF614	Q8N883	585 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	FNDC5	Q8NAU1	212 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	SFXN5	Q8TD22	340 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	ZFP90	Q8TF47	636 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	S100PBP	Q96BU1	408 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	ATP6V1G3	Q96LB4	118 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	C1orf50	Q9BV19	199 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	CXorf36	Q9H7Y0	433 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	NGB	Q9NPG2	151 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	ICAM5	Q9UMF0	924 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	HIVEP2	P31629	2446 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	TLN2	Q9Y4G6	2542 aa		13.66	□□□□□ -0.22
MRPL55-231	ENST00000492170	ZAN	Q9Y493	2812 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	CFLAR	O15519	480 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	OIP5	O43482	229 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	GCM2	O75603	506 aa	Predicted RBP	13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	SASH3	O75995	380 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	PRKD3	O94806	890 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	PRKCA	P17252	672 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	SLC7A1	P30825	629 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	SLC1A6	P48664	564 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	RNF144A	P50876	292 aa	Predicted RBP	13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	CCR4	P51679	360 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	RPS4X	P62701	263 aa	Known RBP	13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	PPP2R2B	Q00005	443 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	BHLHB9	Q6PI77	547 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	NUFIP2	Q7Z417	695 aa	Known RBP	13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	GABRG1	Q8N1C3	465 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	SLC43A2	Q8N370	569 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	ATP6V1C2	Q8NEY4	427 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	TOR1AIP2	Q8NFQ8	470 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	RAB3IL1	Q8TBN0	382 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	KISS1R	Q969F8	398 aa	Predicted RBP	13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	COQ8B	Q96D53	544 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	MRGPRX4	Q96LA9	322 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	COQ10B	Q9H8M1	238 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	GPATCH2	Q9NW75	528 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	NKIRAS1	Q9NYS0	192 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	RAP2C	Q9Y3L5	183 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	DTNA	Q9Y4J8	743 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	RNF115	Q9Y4L5	304 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	USF3	Q68DE3	2245 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	JMJD1C	Q15652	2540 aa		13.65	□□□□□ -0.22
MRPL55-231	ENST00000492170	CSPG4	Q6UVK1	2322 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	NPIPB9	F8W1W9	429 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	CLOCK	O15516	846 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	EFNA2	O43921	213 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	SNN	O75324	88 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	SKAP2	O75563	359 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	UBL4A	P11441	157 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	PRPS1L1	P21108	318 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	SOAT1	P35610	550 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	BST1	Q10588	318 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	STX3	Q13277	289 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	TOMM34	Q15785	309 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	NDUFAF6	Q330K2	333 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	C6orf136	Q5SQH8	315 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	SFRP5	Q5T4F7	317 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	IL23R	Q5VWK5	629 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	KIRREL3	Q8IZU9	778 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	ZNF781	Q8N8C0	355 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	RFWD2	Q8NHY2	731 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	GPR119	Q8TDV5	335 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	C3orf30	Q96M34	536 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	OR7D2	Q96RA2	312 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	USB1	Q9BQ65	265 aa	Known RBP	13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	BHLHE41	Q9C0J9	482 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	ESRP2	Q9H6T0	727 aa	Known RBP	13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	KLHL9	Q9P2J3	617 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	LAMP3	Q9UQV4	416 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	KCNE3	Q9Y6H6	103 aa		13.64	□□□□□ -0.23
MRPL55-231	ENST00000492170	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	ZNF264	O43296	627 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	EIF4E2	O60573	245 aa	Known RBP	13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	AK1	P00568	194 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	CD3E	P07766	207 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	YES1	P07947	543 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	RAC3	P60763	192 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	CBFB	Q13951	182 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	CAPRIN1	Q14444	709 aa	Known RBP	13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	P2RY6	Q15077	328 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms