RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 NID1P14543 1247 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 GDF1P27539 372 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 SRD5A2P31213 254 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 SUMO3P55854 103 aaPredicted RBP13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 PCBP3P57721 371 aaKnown RBP13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 SCARB2Q14108 478 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 ZSWIM7Q19AV6 140 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 RPS26P11Q5JNZ5 115 aaPredicted RBP13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 WLSQ5T9L3 541 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 RIPPLY2Q5TAB7 128 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 RNF220Q5VTB9 566 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 ERICH5Q6P6B1 374 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 PEX5LQ8IYB4 626 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 ZZZ3Q8IYH5 903 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 TOR1AIP2Q8NFQ8 470 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 OR4K17Q8NGC6 315 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 NFKBIDQ8NI38 313 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 NEIL3Q8TAT5 605 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 DUSP19Q8WTR2 217 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 ZNF559Q9BR84 538 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 OR2B2Q9GZK3 357 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 QRSL1Q9H0R6 528 aaKnown RBP13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 SPAG4Q9NPE6 437 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 NDE1Q9NXR1 346 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 FBXL2Q9UKC9 423 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 ANGPT4Q9Y264 503 aa13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 PHF3Q92576 2039 aaKnown RBP13.59□□□□□ -0.23
CDC42SE1-205ENST00000491825 FAM220BPB1ANY3 271 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 ZNF264O43296 627 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 EIF4E2O60573 245 aaKnown RBP13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 DNAJA2O60884 412 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 GABRA1P14867 456 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 CALB2P22676 271 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 PGM1P36871 562 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 CPA2P48052 419 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 SLC7A2P52569 658 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 DSCR4P56555 118 aaPredicted RBP13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 ZNF117Q03924 483 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 SKP2Q13309 424 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 VEZF1Q14119 521 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 VMACQ2NL98 169 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 SLC25A35Q3KQZ1 300 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 LIN52Q52LA3 116 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 OR5M10Q6IEU7 315 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 EIF3MQ7L2H7 374 aaKnown RBP13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 KRT73Q86Y46 540 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 SLC15A3Q8IY34 581 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 ULK2Q8IYT8 1036 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 PGAM4Q8N0Y7 254 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 ZNF614Q8N883 585 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 GATSQ8NAP1 163 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 PHOSPHO1Q8TCT1 267 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 WDR60Q8WVS4 1066 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 ZG16BQ96DA0 208 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 ZNF583Q96ND8 569 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 PTGES2Q9H7Z7 377 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 SLC24A3Q9HC58 644 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 EXOSC3Q9NQT5 275 aaKnown RBP13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 CMTM6Q9NX76 183 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 ICAM5Q9UMF0 924 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 IFT52Q9Y366 437 aa13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 GPC6Q9Y625 555 aaPredicted RBP13.58□□□□□ -0.24
CDC42SE1-205ENST00000491825 NF1P21359 2839 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 INTS1Q8N201 2190 aaKnown RBP13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 NME4O00746 187 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 HCRTR2O43614 444 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 CSTAP01040 98 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 PABPC4LP0CB38 370 aaKnown RBP13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 IL7RP16871 459 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 P2RX1P51575 399 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 PSME3P61289 254 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 KCNJ10P78508 379 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 PLAURQ03405 335 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 INTS11Q5TA45 600 aaKnown RBP13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 RELL2Q8NC24 303 aaPredicted RBP13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 NAXEQ8NCW5 288 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 OR2T12Q8NG77 320 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 OR52P1PQ8NH57 321 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 B4GALNT2Q8NHY0 566 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 NRGNQ92686 78 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 ARSGQ96EG1 525 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 C1GALT1C1Q96EU7 318 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 NSL1Q96IY1 281 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 ZNF607Q96SK3 696 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 SPATA5L1Q9BVQ7 753 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 EXO5Q9H790 373 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 CACYBPQ9HB71 228 aaKnown RBP13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 MED11Q9P086 117 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 TMEM181Q9P2C4 612 aa13.57□□□□□ -0.24
CDC42SE1-205ENST00000491825 A0A087WZY1 265 aa13.56□□□□□ -0.24
CDC42SE1-205ENST00000491825 C7orf72A4D263 438 aa13.56□□□□□ -0.24
CDC42SE1-205ENST00000491825 CDHR4A6H8M9 788 aa13.56□□□□□ -0.24
CDC42SE1-205ENST00000491825 KDM4EB2RXH2 506 aaPredicted RBP13.56□□□□□ -0.24
CDC42SE1-205ENST00000491825 FAM47E-STBD1D6RA91 191 aa13.56□□□□□ -0.24
CDC42SE1-205ENST00000491825 T-ENOLP0DO92 83 aa13.56□□□□□ -0.24
CDC42SE1-205ENST00000491825 DPP4P27487 766 aa13.56□□□□□ -0.24
CDC42SE1-205ENST00000491825 PRKAR1BP31321 381 aa13.56□□□□□ -0.24
CDC42SE1-205ENST00000491825 DNAJA1P31689 397 aaKnown RBP13.56□□□□□ -0.24
CDC42SE1-205ENST00000491825 EEFSECP57772 596 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms