RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 CHCHD6Q9BRQ6 235 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 EBPLQ9BY08 206 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 OR51E2Q9H255 320 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 TP63Q9H3D4 680 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-219ENST00000491747 CDCP1Q9H5V8 836 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 IMPAD1Q9NX62 359 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 STMN3Q9NZ72 180 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF221Q9UK13 617 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 SHANK1Q9Y566 2161 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 BLACEA4D250 179 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 TMEM200CA6NKL6 621 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 HRKO00198 91 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 IDH3BO43837 385 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 DDAH2O95865 285 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 STSP08842 583 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 SPNP16150 400 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 BUD31P41223 144 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-219ENST00000491747 SLC15A1P46059 708 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 MAPK12P53778 367 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 WNT3P56703 355 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 ST3GAL4Q11206 333 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 ELAVL1Q15717 326 aaKnown RBP8.66□□□□□ -1.02
BRCA1-219ENST00000491747 IGFBP7Q16270 282 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 ACER2Q5QJU3 275 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 NDUFAF5Q5TEU4 345 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 Q6ZPB1 254 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF367Q7RTV3 350 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 OR10G2Q8NGC3 310 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 SPPL2AQ8TCT8 520 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 C17orf50Q8WW18 174 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 HAS2Q92819 552 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 TMCO6Q96DC7 493 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 CENPOQ9BU64 300 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 CRNNQ9UBG3 495 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-219ENST00000491747 ENOPH1Q9UHY7 261 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 CES1P1Q9UKY3 287 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 WBP11Q9Y2W2 641 aaKnown RBP8.66□□□□□ -1.02
BRCA1-219ENST00000491747 TRBV11-1A0A0K0K1C0 115 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 A8MVJ9 347 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 C17orf105B2RV13 164 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 GPR75O95800 540 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 PTHP01270 115 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 C1QCP02747 245 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 HSMCR30P0CW71 290 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 TLX1P31314 330 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-219ENST00000491747 GRK5P34947 590 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 PCGF2P35227 344 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 C21orf58P58505 322 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 SELENOWP63302 87 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.65□□□□□ -1.02
BRCA1-219ENST00000491747 SERTAD2Q14140 314 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF468Q5VIY5 522 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-219ENST00000491747 ABHD17BQ5VST6 288 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 FAM180BQ6P0A1 224 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 C16orf47Q6ZP98 133 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-219ENST00000491747 CLECL1Q8IZS7 167 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 C11orf65Q8NCR3 313 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 IL17RDQ8NFM7 739 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 SETD6Q8TBK2 473 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF721Q8TF20 911 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 THAP3Q8WTV1 239 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-219ENST00000491747 TM9SF4Q92544 642 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 Q96MT0 163 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 SLC30A2Q9BRI3 323 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 DUSP26Q9BV47 211 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF556Q9HAH1 456 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 ANKRD10Q9NXR5 420 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 MAPRE3Q9UPY8 281 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 NTNG1Q9Y2I2 539 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 EML6Q6ZMW3 1958 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 TTLL8A6PVC2 850 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 PCDH7O60245 1069 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 ABCB1P08183 1280 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-219ENST00000491747 ITGA2P17301 1181 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 TNNI3P19429 210 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 AQP1P29972 269 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 TNFSF10P50591 281 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 NUDT6P53370 316 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 OR2B6P58173 313 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 ARG2P78540 354 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 DUSP2Q05923 314 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 ACSM2AQ08AH3 577 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 PRSS53Q2L4Q9 553 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 ACSM2BQ68CK6 577 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 NANOGNBQ7Z5D8 188 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 CCDC190Q86UF4 302 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 RPS19BP1Q86WX3 136 aaKnown RBP8.65□□□□□ -1.02
BRCA1-219ENST00000491747 SLC5A8Q8N695 610 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 CDC26Q8NHZ8 85 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 SLC2A12Q8TD20 617 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 METTL2AQ96IZ6 378 aaKnown RBP8.65□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF354BQ96LW1 612 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 SIGLEC12Q96PQ1 595 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 SNX18Q96RF0 628 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 OR8D2Q9GZM6 311 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 NDEL1Q9GZM8 345 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 QPCTLQ9NXS2 382 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 NDUFAF4Q9P032 175 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 BTNL2Q9UIR0 455 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 CAB39Q9Y376 341 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms