RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 POLR3GO15318 223 aaPredicted RBP13.53□□□□□ -0.24
USP39-217ENST00000491659 GOSR1O95249 250 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 ANP32DO95626 131 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 KRT75O95678 551 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 GSNP06396 782 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 UBTFL6P0CB48 400 aaPredicted RBP13.53□□□□□ -0.24
USP39-217ENST00000491659 CD8BP10966 210 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 IL11P20809 199 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 KCNJ5P48544 419 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 CTBP2P56545 445 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 STX1BP61266 288 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 FUT5Q11128 374 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 SELENBP1Q13228 472 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 DAZAP2Q15038 168 aaPredicted RBP13.53□□□□□ -0.24
USP39-217ENST00000491659 TOMM34Q15785 309 aaPredicted RBP13.53□□□□□ -0.24
USP39-217ENST00000491659 FRRS1Q6ZNA5 592 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 BTLAQ7Z6A9 289 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 MIER2Q8N344 545 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 REXO5Q96IC2 774 aaKnown RBP13.53□□□□□ -0.24
USP39-217ENST00000491659 GMPPAQ96IJ6 420 aaPredicted RBP13.53□□□□□ -0.24
USP39-217ENST00000491659 SLC39A3Q9BRY0 314 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 THUMPD3Q9BV44 507 aaKnown RBP13.53□□□□□ -0.24
USP39-217ENST00000491659 OPN3Q9H1Y3 402 aaPredicted RBP13.53□□□□□ -0.24
USP39-217ENST00000491659 SDR39U1Q9NRG7 319 aaPredicted RBP13.53□□□□□ -0.24
USP39-217ENST00000491659 GLRX2Q9NS18 164 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 NDRG3Q9UGV2 375 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 KCNE5Q9UJ90 142 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 LIPT1Q9Y234 373 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 SH3D21A4FU49 640 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 HMGB1P1B2RPK0 211 aaPredicted RBP13.52□□□□□ -0.25
USP39-217ENST00000491659 SS18L1O75177 396 aaPredicted RBP13.52□□□□□ -0.25
USP39-217ENST00000491659 H6PDO95479 791 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 PABPC4LP0CB38 370 aaKnown RBP13.52□□□□□ -0.25
USP39-217ENST00000491659 POU2F1P14859 743 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 PGCP20142 388 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 CD79BP40259 229 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 SLC6A8P48029 635 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 PCYT1AP49585 367 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 GUSBP1Q15486 140 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 TIGD2Q4W5G0 525 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 SLC25A53Q5H9E4 307 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 GTF2IRD2BQ6EKJ0 949 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 EPGNQ6UW88 154 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 MSANTD1Q6ZTZ1 278 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 GTF2IRD2Q86UP8 949 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 ATP6V1C2Q8NEY4 427 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 OR6K3Q8NGY3 331 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 PNPT1Q8TCS8 783 aaKnown RBP13.52□□□□□ -0.25
USP39-217ENST00000491659 ZFP90Q8TF47 636 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 TMEM234Q8WY98 164 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 ST8SIA1Q92185 356 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 OSTF1Q92882 214 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 CPNE4Q96A23 557 aaPredicted RBP13.52□□□□□ -0.25
USP39-217ENST00000491659 DACH2Q96NX9 599 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 TRNT1Q96Q11 434 aaKnown RBP13.52□□□□□ -0.25
USP39-217ENST00000491659 SAP130Q9H0E3 1048 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 VIPAS39Q9H9C1 493 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 TCF7L2Q9NQB0 619 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 ELOVL5Q9NYP7 299 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 CSMD2Q7Z408 3487 aa13.52□□□□□ -0.25
USP39-217ENST00000491659 FAM221AA4D161 298 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 CASKO14936 926 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 TGDSO95455 350 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 NTN1O95631 604 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 CGAP01215 116 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 SHC1P29353 583 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 SLC7A1P30825 629 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 PGM1P36871 562 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 MAGEA8P43361 318 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 POLR2JP52435 117 aaKnown RBP13.51□□□□□ -0.25
USP39-217ENST00000491659 CARD18P57730 90 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 CHRNEQ04844 493 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 MAPK14Q16539 360 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 ZNF239Q16600 458 aaKnown RBP13.51□□□□□ -0.25
USP39-217ENST00000491659 TMEM176BQ3YBM2 270 aaPredicted RBP13.51□□□□□ -0.25
USP39-217ENST00000491659 C3orf33Q6P1S2 294 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 FAM71CQ8NEG0 241 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 OR9I1Q8NGQ6 314 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 ITCHQ96J02 903 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 SLCO1B3Q9NPD5 702 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.51□□□□□ -0.25
USP39-217ENST00000491659 INTS9Q9NV88 658 aaKnown RBP13.51□□□□□ -0.25
USP39-217ENST00000491659 CLEC4AQ9UMR7 237 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 EDARQ9UNE0 448 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 OTOGQ6ZRI0 2925 aa13.51□□□□□ -0.25
USP39-217ENST00000491659 FAM234BA2RU67 622 aa13.5□□□□□ -0.25
USP39-217ENST00000491659 ETV2O00321 342 aaPredicted RBP13.5□□□□□ -0.25
USP39-217ENST00000491659 C1QCP02747 245 aa13.5□□□□□ -0.25
USP39-217ENST00000491659 NR2F1P10589 423 aa13.5□□□□□ -0.25
USP39-217ENST00000491659 H2AFXP16104 143 aaPredicted RBP13.5□□□□□ -0.25
USP39-217ENST00000491659 DNAJA1P31689 397 aaKnown RBP13.5□□□□□ -0.25
USP39-217ENST00000491659 PPP2R2AP63151 447 aa13.5□□□□□ -0.25
USP39-217ENST00000491659 FAM27E3Q08E93 113 aa13.5□□□□□ -0.25
USP39-217ENST00000491659 GNA13Q14344 377 aa13.5□□□□□ -0.25
USP39-217ENST00000491659 RNPS1Q15287 305 aaKnown RBP13.5□□□□□ -0.25
USP39-217ENST00000491659 SYPL1Q16563 259 aa13.5□□□□□ -0.25
USP39-217ENST00000491659 COX20Q5RI15 118 aa13.5□□□□□ -0.25
USP39-217ENST00000491659 C6orf10Q5SRN2 563 aa13.5□□□□□ -0.25
USP39-217ENST00000491659 ZNF474Q6S9Z5 364 aaPredicted RBP13.5□□□□□ -0.25
USP39-217ENST00000491659 LRRC74BQ6ZQY2 392 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms