RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 LIN37Q96GY3 246 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-219ENST00000491128 LRFN5Q96NI6 719 aa12.75□□□□□ -0.37
SMPD4-219ENST00000491128 NPAS1Q99742 590 aa12.75□□□□□ -0.37
SMPD4-219ENST00000491128 DGCR6LQ9BY27 220 aa12.75□□□□□ -0.37
SMPD4-219ENST00000491128 DEFB126Q9BYW3 111 aa12.75□□□□□ -0.37
SMPD4-219ENST00000491128 IMPAD1Q9NX62 359 aa12.75□□□□□ -0.37
SMPD4-219ENST00000491128 MYOTQ9UBF9 498 aa12.75□□□□□ -0.37
SMPD4-219ENST00000491128 RPS6KB2Q9UBS0 482 aa12.75□□□□□ -0.37
SMPD4-219ENST00000491128 C19orf25Q9UFG5 118 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-219ENST00000491128 TCFL5Q9UL49 500 aa12.75□□□□□ -0.37
SMPD4-219ENST00000491128 COL5A1P20908 1838 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-219ENST00000491128 TRAV27A0A087WT01 109 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 ZAR1LA6NP61 321 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 ZNF264O43296 627 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 SOX30O94993 753 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 F10P00742 488 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 TBXA2RP21731 343 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 EVI2BP34910 448 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 PSMD4P55036 377 aaKnown RBP12.74□□□□□ -0.37
SMPD4-219ENST00000491128 DCAF7P61962 342 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 GINS1Q14691 196 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 OR10G3Q8NGC4 313 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 PITX2Q99697 317 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 PSD2Q9BQI7 771 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 ZNF559Q9BR84 538 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 POLR1BQ9H9Y6 1135 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 ERVK-18Q9QC07 812 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 AKAP13Q12802 2813 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 CCDC187A0A096LP49 1063 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 ARRDC5A6NEK1 342 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 OR6C76A6NM76 312 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 SAGP10523 405 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-219ENST00000491128 NRG3P56975 720 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 AP1ARQ63HQ0 302 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 PTCHD4Q6ZW05 846 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 GRAMD2AQ8IUY3 354 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 PARP8Q8N3A8 854 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 OR13C2Q8NGS9 318 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 ZNF563Q8TA94 476 aa12.74□□□□□ -0.37
SMPD4-219ENST00000491128 MRTO4Q9UKD2 239 aaKnown RBP12.74□□□□□ -0.37
SMPD4-219ENST00000491128 SPENQ96T58 3664 aaKnown RBP12.73□□□□□ -0.37
SMPD4-219ENST00000491128 E9PQ18 207 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 SOCS6O14544 535 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 TO15178 435 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 DLGAP3O95886 979 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 NUBP1P53384 320 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 COPZ1P61923 177 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 CRYZQ08257 329 aaKnown RBP12.73□□□□□ -0.37
SMPD4-219ENST00000491128 ILKQ13418 452 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 ASCL5Q7RTU5 278 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 TCEANCQ8N8B7 351 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 ZNF540Q8NDQ6 660 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 SETD9Q8NE22 299 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 HSPBAP1Q96EW2 488 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 MRPS26Q9BYN8 205 aaKnown RBP12.73□□□□□ -0.37
SMPD4-219ENST00000491128 DNAJC27Q9NZQ0 273 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 NXT1Q9UKK6 140 aaKnown RBP12.73□□□□□ -0.37
SMPD4-219ENST00000491128 SHISA8B8ZZ34 492 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 G3V3Y1 287 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 PRKYO43930 277 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 FAM20BO75063 409 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 ZFAND5O76080 213 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 SLC2A10O95528 541 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 NADKO95544 446 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-219ENST00000491128 ESRRGP62508 458 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 IL10RAQ13651 578 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 PRAMEF20Q5VT98 475 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 SMARCD3Q6STE5 483 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 IL20RBQ6UXL0 311 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 AHSA2Q719I0 299 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 ZNF550Q7Z398 422 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 GNPDA2Q8TDQ7 276 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 HDAC2Q92769 488 aaKnown RBP12.73□□□□□ -0.37
SMPD4-219ENST00000491128 PMM1Q92871 262 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 C3orf49Q96BT1 292 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 BPIFA2Q96DR5 249 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 SAMD8Q96LT4 415 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 SPRY4Q9C004 299 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 IL17BQ9UHF5 180 aa12.73□□□□□ -0.37
SMPD4-219ENST00000491128 FARSAQ9Y285 508 aaKnown RBP12.73□□□□□ -0.37
SMPD4-219ENST00000491128 MED12Q93074 2177 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 NSG1A0A0A6YYJ2 146 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 LOC101059948A0A1B0GTJ6 334 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 TTC36A6NLP5 189 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 TLX2O43763 284 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-219ENST00000491128 ITGA10O75578 1167 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 PPM1BO75688 479 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 DLSTP36957 453 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 SOX3P41225 446 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 MAP2K4P45985 399 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 GIPRP48546 466 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 PNLIPRP2P54317 469 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 FXYD6P3P58550 94 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 TSPAN31Q12999 210 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 KCTD21Q4G0X4 260 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 SLC35F1Q5T1Q4 408 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 TMEM164Q5U3C3 297 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 B3GNTL1Q67FW5 361 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-219ENST00000491128 KCTD8Q6ZWB6 473 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 PPP1R32Q7Z5V6 425 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms