RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 ARHGDIAP52565 204 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 PPIAP62937 165 aaKnown RBP9.97□□□□□ -0.81
VARS2-210ENST00000490699 ALDH6A1Q02252 535 aaKnown RBP9.97□□□□□ -0.81
VARS2-210ENST00000490699 ST3GAL3Q11203 375 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 KLRB1Q12918 225 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 CCNIQ14094 377 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 QPRTQ15274 297 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 NDUFAF6Q330K2 333 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 LINC00303Q3SY05 128 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 GLIPR1L2Q4G1C9 344 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 SWT1Q5T5J6 900 aaKnown RBP9.97□□□□□ -0.81
VARS2-210ENST00000490699 RAET1LQ5VY80 246 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 RPUSD3Q6P087 351 aaKnown RBP9.97□□□□□ -0.81
VARS2-210ENST00000490699 AAGABQ6PD74 315 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 ZNF613Q6PF04 617 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 RRM2BQ7LG56 351 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 ZNF227Q86WZ6 799 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 FAM109AQ8N4B1 249 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 FADS6Q8N9I5 356 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 ZFP62Q8NB50 900 aaPredicted RBP9.97□□□□□ -0.81
VARS2-210ENST00000490699 PIK3C3Q8NEB9 887 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 OR6T1Q8NGN1 323 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 CANT1Q8WVQ1 401 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 SDCCAG3Q96C92 435 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 C1GALT1C1Q96EU7 318 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 CRELD1Q96HD1 420 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 MRGPRX4Q96LA9 322 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 PRRC1Q96M27 445 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 GNRHR2Q96P88 292 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 PIGQQ9BRB3 760 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 HES7Q9BYE0 225 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 TTTY12Q9BZ98 90 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 LDAHQ9H6V9 325 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 CCM2LQ9NUG4 571 aaPredicted RBP9.97□□□□□ -0.81
VARS2-210ENST00000490699 ICAM5Q9UMF0 924 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 VDAC3Q9Y277 283 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 ENPP4Q9Y6X5 453 aa9.97□□□□□ -0.81
VARS2-210ENST00000490699 PTPRQQ9UMZ3 2332 aa9.96□□□□□ -0.81
VARS2-210ENST00000490699 ELOA3DA6NLF2 546 aaPredicted RBP9.96□□□□□ -0.82
VARS2-210ENST00000490699 CPSF4LA6NMK7 179 aaKnown RBP9.96□□□□□ -0.82
VARS2-210ENST00000490699 GJE1A6NN92 205 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 FAM166BA8MTA8 275 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 LINC01387J3KSC0 135 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 FRS3O43559 492 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 E2F6O75461 281 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 KRT36O76013 467 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 OR5F1O95221 314 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 CST1P01037 141 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 ZNF17P17021 662 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 TNFRSF1BP20333 461 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 CXCR1P25024 350 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 FASP25445 335 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 FKBP2P26885 142 aaKnown RBP9.96□□□□□ -0.82
VARS2-210ENST00000490699 ADH6P28332 368 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 APOBEC1P41238 236 aaKnown RBP9.96□□□□□ -0.82
VARS2-210ENST00000490699 SLC1A3P43003 542 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 POLR2HP52434 150 aaKnown RBP9.96□□□□□ -0.82
VARS2-210ENST00000490699 MAP2K6P52564 334 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 CRYBA2P53672 197 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 SPIBQ01892 262 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 GK3PQ14409 553 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 SLC10A1Q14973 349 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 OR1Q1Q15612 314 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 ELOA3BQ3SY89 546 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 GLYR1Q49A26 553 aaPredicted RBP9.96□□□□□ -0.82
VARS2-210ENST00000490699 ALG10BQ5I7T1 473 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 ENTPD8Q5MY95 495 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 SLC6A19Q695T7 634 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 ULK3Q6PHR2 472 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 CBLN3Q6UW01 205 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 GRINAQ7Z429 371 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 ADGRG5Q8IZF4 528 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 RBMXL3Q8N7X1 1067 aaKnown RBP9.96□□□□□ -0.82
VARS2-210ENST00000490699 LSMEM1Q8N8F7 131 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 WDSUB1Q8N9V3 476 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 ELOA3Q8NG57 546 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 PHF10Q8WUB8 498 aaKnown RBP9.96□□□□□ -0.82
VARS2-210ENST00000490699 ZNF300Q96RE9 604 aaPredicted RBP9.96□□□□□ -0.82
VARS2-210ENST00000490699 UBL7Q96S82 380 aaPredicted RBP9.96□□□□□ -0.82
VARS2-210ENST00000490699 PIP5K1AQ99755 562 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 BDH2Q9BUT1 245 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 CHID1Q9BWS9 393 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 ZNF703Q9H7S9 590 aaPredicted RBP9.96□□□□□ -0.82
VARS2-210ENST00000490699 REEP1Q9H902 201 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 AGPAT4Q9NRZ5 378 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 DEPPQ9NTK1 212 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 ACER3Q9NUN7 267 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 MED17Q9NVC6 651 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 TMCC3Q9ULS5 477 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 MRPS18CQ9Y3D5 142 aaKnown RBP9.96□□□□□ -0.82
VARS2-210ENST00000490699 FRYQ5TBA9 3013 aa9.96□□□□□ -0.82
VARS2-210ENST00000490699 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.95□□□□□ -0.82
VARS2-210ENST00000490699 A0A0G2JMM0 328 aa9.95□□□□□ -0.82
VARS2-210ENST00000490699 A0A1W2PPB8 328 aa9.95□□□□□ -0.82
VARS2-210ENST00000490699 A0A1W2PRS3 328 aa9.95□□□□□ -0.82
VARS2-210ENST00000490699 KIR3DP1A8MWS1 328 aa9.95□□□□□ -0.82
VARS2-210ENST00000490699 CHP2O43745 196 aa9.95□□□□□ -0.82
VARS2-210ENST00000490699 ENTPD5O75356 428 aa9.95□□□□□ -0.82
VARS2-210ENST00000490699 GADD45GO95257 159 aa9.95□□□□□ -0.82
VARS2-210ENST00000490699 LDLRP01130 860 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms