RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 ABCE1P61221 599 aaKnown RBP17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 LTBQ06643 244 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 MAD2L1Q13257 205 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 SKP2Q13309 424 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 CHI3L2Q15782 390 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ZNF141Q15928 474 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 PDCD2Q16342 344 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ARHGAP11BQ3KRB8 267 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 HEPHL1Q6MZM0 1159 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 PRSS57Q6UWY2 283 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 TFAP2EQ6VUC0 442 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 P3H2Q8IVL5 708 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 OR8J2Q8NGG1 315 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ZFP90Q8TF47 636 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 MRGPRX4Q96LA9 322 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 KLHL13Q9P2N7 655 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 V9GYY5 206 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 SERINC4A6NH21 518 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 BIRC5O15392 142 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 UGT2B17O75795 530 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 C1QCP02747 245 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 SERPINE1P05121 402 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 SOAT1P35610 550 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 CASP9P55211 416 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 QPRTQ15274 297 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 RNPS1Q15287 305 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 TSC22D1Q15714 1073 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 MAPK14Q16539 360 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 TNFAIP8L3Q5GJ75 292 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 FCRLAQ7L513 359 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ZNF614Q8N883 585 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ATP6V1C2Q8NEY4 427 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 RFWD2Q8NHY2 731 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 MIPOL1Q8TD10 442 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 PLPPR2Q96GM1 343 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 COX4I2Q96KJ9 171 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 Q96MF0 132 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 LAT2Q9GZY6 243 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 GP6Q9HCN6 339 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 SSU72Q9NP77 194 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 TIGARQ9NQ88 270 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 HAO1Q9UJM8 370 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 MKLN1Q9UL63 735 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 DNHD1Q96M86 4753 aa17.26■□□□□ 0.35
TNFRSF1B-202ENST00000489921 TLN2Q9Y4G6 2542 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 IGHV3-15A0A0B4J1V0 119 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 A0A1W2PNR3 127 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 GJE1A6NN92 205 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ZNF814B7Z6K7 855 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 BCAS1O75363 584 aaPredicted RBP17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 PRKD3O94806 890 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 H6PDO95479 791 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 YES1P07947 543 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 PABPC4LP0CB38 370 aaKnown RBP17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 UBL4AP11441 157 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 PAX1P15863 534 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 EDNRAP25101 427 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ADSLP30566 484 aaPredicted RBP17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 FUT5Q11128 374 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 GPR68Q15743 365 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 KRT71Q3SY84 523 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 BHLHB9Q6PI77 547 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 SEZ6L2Q6UXD5 910 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ZNF704Q6ZNC4 412 aaPredicted RBP17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 YTHDF3Q7Z739 585 aaKnown RBP17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 STK32CQ86UX6 486 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 WFDC8Q8IUA0 241 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 LILRB1Q8NHL6 650 aaPredicted RBP17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 S100PBPQ96BU1 408 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 PERPQ96FX8 193 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 PSD2Q9BQI7 771 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 THUMPD3Q9BV44 507 aaKnown RBP17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 GSX2Q9BZM3 304 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ZNF350Q9GZX5 532 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 QRSL1Q9H0R6 528 aaKnown RBP17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 OR51I1Q9H343 314 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 RAP2CQ9Y3L5 183 aa17.25■□□□□ 0.35
TNFRSF1B-202ENST00000489921 USF3Q68DE3 2245 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 UQCRHLA0A096LP55 91 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 RNF103-CHMP3A0A140T963 221 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 PRAMEF27A3QJZ7 478 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 DUXAA6NLW8 204 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 STX11O75558 287 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 RAC3P60763 192 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 PLAURQ03405 335 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 SELENBP1Q13228 472 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 CBFBQ13951 182 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 TIGD2Q4W5G0 525 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 TMEM201Q5SNT2 666 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 SFRP5Q5T4F7 317 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 CLEC9AQ6UXN8 241 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 PLEKHM3Q6ZWE6 761 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ANKRD46Q86W74 232 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 FAM71CQ8NEG0 241 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 TOR1AIP2Q8NFQ8 470 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 RAB3IL1Q8TBN0 382 aa17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ZNF75CPQ92670 426 aaPredicted RBP17.24■□□□□ 0.35
TNFRSF1B-202ENST00000489921 ZG16BQ96DA0 208 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms