RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 ZNF619Q8N2I2 560 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 HDDC3Q8N4P3 179 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 ZNF740Q8NDX6 193 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 SLC5A11Q8WWX8 675 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 DUSP16Q9BY84 665 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 DHX33Q9H6R0 707 aaKnown RBP3.16□□□□□ -1.9
CCDC39-206ENST00000489868 CALHM2Q9HA72 323 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 DCDC2Q9UHG0 476 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 SMC3Q9UQE7 1217 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 PLLPQ9Y342 182 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 OARD1Q9Y530 152 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 CACNG2Q9Y698 323 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 CLCA3PQ9Y6N3 262 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 NCAPD2Q15021 1401 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 SULT2B1O00204 365 aa3.15□□□□□ -1.91
CCDC39-206ENST00000489868 CHADO15335 359 aa3.15□□□□□ -1.91
CCDC39-206ENST00000489868 OR4F21O95013 312 aa3.15□□□□□ -1.91
CCDC39-206ENST00000489868 STMN1P16949 149 aa3.15□□□□□ -1.91
CCDC39-206ENST00000489868 RCC1P18754 421 aaPredicted RBP3.15□□□□□ -1.91
CCDC39-206ENST00000489868 UNC119Q13432 240 aa3.15□□□□□ -1.91
CCDC39-206ENST00000489868 SLC5A12Q1EHB4 618 aa3.15□□□□□ -1.91
CCDC39-206ENST00000489868 DNAJC21Q5F1R6 531 aaKnown RBP3.15□□□□□ -1.91
CCDC39-206ENST00000489868 TFDP3Q5H9I0 405 aa3.15□□□□□ -1.91
CCDC39-206ENST00000489868 FAHD2BQ6P2I3 314 aaPredicted RBP3.15□□□□□ -1.91
CCDC39-206ENST00000489868 ARMCX2Q7L311 632 aa3.15□□□□□ -1.91
CCDC39-206ENST00000489868 CATSPER4Q7RTX7 472 aa3.15□□□□□ -1.91
CCDC39-206ENST00000489868 MISPQ8IVT2 679 aa3.15□□□□□ -1.91
CCDC39-206ENST00000489868 GCNT2Q8N0V5 402 aa3.15□□□□□ -1.91
CCDC39-206ENST00000489868 ARIH2OSQ8N7S6 290 aa3.15□□□□□ -1.91
CCDC39-206ENST00000489868 FAHD2AQ96GK7 314 aa3.15□□□□□ -1.91
CCDC39-206ENST00000489868 TBX15Q96SF7 602 aa3.15□□□□□ -1.91
CCDC39-206ENST00000489868 KLHDC3Q9BQ90 382 aa3.15□□□□□ -1.91
CCDC39-206ENST00000489868 UGT2A1Q9Y4X1 527 aa3.15□□□□□ -1.91
CCDC39-206ENST00000489868 KRT87PA6NCN2 255 aa3.14□□□□□ -1.91
CCDC39-206ENST00000489868 A8MUA0 341 aa3.14□□□□□ -1.91
CCDC39-206ENST00000489868 SLITRK3O94933 977 aa3.14□□□□□ -1.91
CCDC39-206ENST00000489868 MBD3O95983 291 aa3.14□□□□□ -1.91
CCDC39-206ENST00000489868 INSP01308 110 aa3.14□□□□□ -1.91
CCDC39-206ENST00000489868 GAP43P17677 238 aa3.14□□□□□ -1.91
CCDC39-206ENST00000489868 NMT1P30419 496 aaKnown RBP3.14□□□□□ -1.91
CCDC39-206ENST00000489868 RIPPLY1Q0D2K3 151 aa3.14□□□□□ -1.91
CCDC39-206ENST00000489868 RAB40BQ12829 278 aa3.14□□□□□ -1.91
CCDC39-206ENST00000489868 APTXQ7Z2E3 356 aaKnown RBP3.14□□□□□ -1.91
CCDC39-206ENST00000489868 SELENOMQ8WWX9 145 aa3.14□□□□□ -1.91
CCDC39-206ENST00000489868 KCNK16Q96T55 309 aa3.14□□□□□ -1.91
CCDC39-206ENST00000489868 CRNKL1Q9BZJ0 848 aaKnown RBP3.14□□□□□ -1.91
CCDC39-206ENST00000489868 WSB1Q9Y6I7 421 aa3.14□□□□□ -1.91
CCDC39-206ENST00000489868 SPACA6W5XKT8 324 aa3.14□□□□□ -1.91
CCDC39-206ENST00000489868 TTC21BQ7Z4L5 1316 aa3.14□□□□□ -1.91
CCDC39-206ENST00000489868 JAK2O60674 1132 aa3.13□□□□□ -1.91
CCDC39-206ENST00000489868 ZNF780AO75290 641 aaPredicted RBP3.13□□□□□ -1.91
CCDC39-206ENST00000489868 IGHV4-34P06331 123 aa3.13□□□□□ -1.91
CCDC39-206ENST00000489868 ASMTP46597 345 aa3.13□□□□□ -1.91
CCDC39-206ENST00000489868 CSNK1G2P78368 415 aa3.13□□□□□ -1.91
CCDC39-206ENST00000489868 LRRC63Q05C16 580 aa3.13□□□□□ -1.91
CCDC39-206ENST00000489868 SLC10A7Q0GE19 358 aa3.13□□□□□ -1.91
CCDC39-206ENST00000489868 ZNF311Q5JNZ3 666 aa3.13□□□□□ -1.91
CCDC39-206ENST00000489868 PAGE3Q5JUK9 113 aa3.13□□□□□ -1.91
CCDC39-206ENST00000489868 RNF165Q6ZSG1 346 aa3.13□□□□□ -1.91
CCDC39-206ENST00000489868 CENPUQ71F23 418 aa3.13□□□□□ -1.91
CCDC39-206ENST00000489868 TMEM17Q86X19 198 aa3.13□□□□□ -1.91
CCDC39-206ENST00000489868 VRK2Q86Y07 508 aa3.13□□□□□ -1.91
CCDC39-206ENST00000489868 CNNM3Q8NE01 707 aa3.13□□□□□ -1.91
CCDC39-206ENST00000489868 CHCHD10Q8WYQ3 142 aaPredicted RBP3.13□□□□□ -1.91
CCDC39-206ENST00000489868 MRPL13Q9BYD1 178 aaKnown RBP3.13□□□□□ -1.91
CCDC39-206ENST00000489868 RAB26Q9ULW5 256 aa3.13□□□□□ -1.91
CCDC39-206ENST00000489868 KIF2AO00139 706 aaPredicted RBP3.12□□□□□ -1.91
CCDC39-206ENST00000489868 CA1P00915 261 aaPredicted RBP3.12□□□□□ -1.91
CCDC39-206ENST00000489868 TPSB2P20231 275 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 CYP2B6P20813 491 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 NAPAP54920 295 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 EWSR1Q01844 656 aaKnown RBP eCLIP3.12□□□□□ -1.91
CCDC39-206ENST00000489868 TPSAB1Q15661 275 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 CBLN3Q6UW01 205 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 RFLNAQ6ZTI6 216 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 ARCQ7LC44 396 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 DPY19L4Q7Z388 723 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 MTURNQ8N3F0 131 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 C15orf54Q8N8G6 183 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 OR51G2Q8NGK0 314 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 OR5L2Q8NGL0 311 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 AENQ8WTP8 325 aaKnown RBP3.12□□□□□ -1.91
CCDC39-206ENST00000489868 AKR1E2Q96JD6 320 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 CHRDL1Q9BU40 450 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 GSDMCQ9BYG8 508 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 WARS2Q9UGM6 360 aaKnown RBP3.12□□□□□ -1.91
CCDC39-206ENST00000489868 ZNF225Q9UK10 706 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 NEUROG3Q9Y4Z2 214 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 SLCO1B1Q9Y6L6 691 aa3.12□□□□□ -1.91
CCDC39-206ENST00000489868 ZNFX1Q9P2E3 1918 aaKnown RBP3.11□□□□□ -1.91
CCDC39-206ENST00000489868 IGLV3-16A0A075B6K0 115 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 TRBV6-6A0A0A6YYG2 114 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 A0A1B0GUL7 405 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 VSTM2BA6NLU5 285 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 FAM166BA8MTA8 275 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 ANKRD63C9JTQ0 380 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 F8WDY8 70 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 GFYI3L273 518 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 GNA14O95837 355 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 IL10P22301 178 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms