RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 Q6ZT83 130 aa8.31□□□□□ -1.08
SNX17-207ENST00000489402 DDIASQ8IXT1 998 aa8.31□□□□□ -1.08
SNX17-207ENST00000489402 TOR1AIP2Q8NFQ8 470 aa8.31□□□□□ -1.08
SNX17-207ENST00000489402 OR56A1Q8NGH5 318 aa8.31□□□□□ -1.08
SNX17-207ENST00000489402 NEUROG1Q92886 237 aa8.31□□□□□ -1.08
SNX17-207ENST00000489402 MRGPRX4Q96LA9 322 aa8.31□□□□□ -1.08
SNX17-207ENST00000489402 TRMOQ9BU70 441 aa8.31□□□□□ -1.08
SNX17-207ENST00000489402 ACTRT3Q9BYD9 372 aa8.31□□□□□ -1.08
SNX17-207ENST00000489402 COQ10BQ9H8M1 238 aa8.31□□□□□ -1.08
SNX17-207ENST00000489402 BCO1Q9HAY6 547 aa8.31□□□□□ -1.08
SNX17-207ENST00000489402 YAE1D1Q9NRH1 226 aa8.31□□□□□ -1.08
SNX17-207ENST00000489402 SIRT3Q9NTG7 399 aaPredicted RBP8.31□□□□□ -1.08
SNX17-207ENST00000489402 ATAD3AQ9NVI7 634 aa8.31□□□□□ -1.08
SNX17-207ENST00000489402 CISD1Q9NZ45 108 aaKnown RBP8.31□□□□□ -1.08
SNX17-207ENST00000489402 ICAM5Q9UMF0 924 aa8.31□□□□□ -1.08
SNX17-207ENST00000489402 CARD8Q9Y2G2 431 aa8.31□□□□□ -1.08
SNX17-207ENST00000489402 RTTNQ86VV8 2226 aa8.31□□□□□ -1.08
SNX17-207ENST00000489402 CSPG4Q6UVK1 2322 aa8.31□□□□□ -1.08
SNX17-207ENST00000489402 IGHV3-15A0A0B4J1V0 119 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 NPIPA5A0A0B4J1W7 369 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 NPIPA7E9PJI5 369 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 ADAM11O75078 769 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 LYZL6O75951 148 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 IGHV4-39P01824 125 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 NPIPA8P0DM63 369 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 UBL4AP11441 157 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 BCKDHAP12694 445 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 ENPP1P22413 925 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 OR3A2P47893 321 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 CCT3P49368 545 aaKnown RBP8.3□□□□□ -1.08
SNX17-207ENST00000489402 ATP12AP54707 1039 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 CDH11P55287 796 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 RASGEF1BQ0VAM2 473 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 CBFBQ13951 182 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 PGGHGQ32M88 737 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 LSM12Q3MHD2 195 aaKnown RBP8.3□□□□□ -1.08
SNX17-207ENST00000489402 KANK2Q63ZY3 851 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 C3orf33Q6P1S2 294 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 HIPK1Q86Z02 1210 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 GSPT2Q8IYD1 628 aaKnown RBP8.3□□□□□ -1.08
SNX17-207ENST00000489402 ZNF100Q8IYN0 542 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 NATD1Q8N6N6 113 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 OR2W6PQ8NHA6 318 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 RFWD2Q8NHY2 731 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 GPR119Q8TDV5 335 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 TWIST2Q8WVJ9 160 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 OR5P2Q8WZ92 322 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 PPP3R2Q96LZ3 170 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 ADAD1Q96M93 576 aaKnown RBP8.3□□□□□ -1.08
SNX17-207ENST00000489402 RHNO1Q9BSD3 238 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 TRAF4Q9BUZ4 470 aaPredicted RBP8.3□□□□□ -1.08
SNX17-207ENST00000489402 TRIM2Q9C040 744 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 GRIP2Q9C0E4 1043 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 PPCSQ9HAB8 311 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 GIMAP2Q9UG22 337 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 ATP6V1HQ9UI12 483 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 DTNAQ9Y4J8 743 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 DNAJC15Q9Y5T4 150 aa8.3□□□□□ -1.08
SNX17-207ENST00000489402 A0A1W2PNR3 127 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 DPRXA6NFQ7 191 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 SMIM23A6NLE4 172 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 A8MV72 311 aaPredicted RBP8.29□□□□□ -1.08
SNX17-207ENST00000489402 ZNF814B7Z6K7 855 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 CFLARO15519 480 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 ZNF264O43296 627 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 EIF4E2O60573 245 aaKnown RBP8.29□□□□□ -1.08
SNX17-207ENST00000489402 CYTIPO60759 359 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 TRIM13O60858 407 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 KRT4P19013 534 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 GGT1P19440 569 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 EDNRAP25101 427 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 NUDT6P53370 316 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 C21orf58P58505 322 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 PCLAFQ15004 111 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 QPRTQ15274 297 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 TOMM34Q15785 309 aaPredicted RBP8.29□□□□□ -1.08
SNX17-207ENST00000489402 NDUFAF6Q330K2 333 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 CHRFAM7AQ494W8 412 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 ARL13AQ5H913 290 aaPredicted RBP8.29□□□□□ -1.08
SNX17-207ENST00000489402 SLC25A53Q5H9E4 307 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 TIMM23BQ5SRD1 257 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.29□□□□□ -1.08
SNX17-207ENST00000489402 AGAP6Q5VW22 663 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 BHLHB9Q6PI77 547 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 GALNT5Q7Z7M9 940 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 DTX2Q86UW9 622 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 P2RY8Q86VZ1 359 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 C10orf107Q8IVU9 208 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 OR7A2PQ8NGA2 310 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 OR5W2Q8NH69 310 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 SFXN5Q8TD22 340 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 UBLCP1Q8WVY7 318 aaPredicted RBP8.29□□□□□ -1.08
SNX17-207ENST00000489402 TMEM234Q8WY98 164 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 TMEM158Q8WZ71 300 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 MOAP1Q96BY2 351 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 RADILQ96JH8 1075 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 OR5B2Q96R09 309 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 PRPF18Q99633 342 aaKnown RBP8.29□□□□□ -1.08
SNX17-207ENST00000489402 PSD2Q9BQI7 771 aa8.29□□□□□ -1.08
SNX17-207ENST00000489402 GATA5Q9BWX5 397 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms