RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 PSMA4P25789 261 aaKnown RBP12.13□□□□□ -0.47
LMO4-203ENST00000489303 IDH3AP50213 366 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 RIPPLY3P57055 190 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 CARD18P57730 90 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 SIRPAP78324 504 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 IRX1P78414 480 aaPredicted RBP12.13□□□□□ -0.47
LMO4-203ENST00000489303 QPRTQ15274 297 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 NDUFAF6Q330K2 333 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 TYW3Q6IPR3 259 aaKnown RBP12.13□□□□□ -0.47
LMO4-203ENST00000489303 DNAJC14Q6Y2X3 702 aaPredicted RBP12.13□□□□□ -0.47
LMO4-203ENST00000489303 SPNS3Q6ZMD2 512 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 GGNQ86UU5 652 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 ZZZ3Q8IYH5 903 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 POC1BQ8TC44 478 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 PNPT1Q8TCS8 783 aaKnown RBP12.13□□□□□ -0.47
LMO4-203ENST00000489303 CKAP2Q8WWK9 683 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 PMM1Q92871 262 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 KLHL15Q96M94 604 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 THUMPD3Q9BV44 507 aaKnown RBP12.13□□□□□ -0.47
LMO4-203ENST00000489303 SAP130Q9H0E3 1048 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 RNF122Q9H9V4 155 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 CACYBPQ9HB71 228 aaKnown RBP12.13□□□□□ -0.47
LMO4-203ENST00000489303 SERINC1Q9NRX5 453 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 THUMPD1Q9NXG2 353 aaKnown RBP12.13□□□□□ -0.47
LMO4-203ENST00000489303 EMC9Q9Y3B6 208 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 MED12Q93074 2177 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 C2CD3Q4AC94 2353 aa12.13□□□□□ -0.47
LMO4-203ENST00000489303 SETD2Q9BYW2 2564 aaPredicted RBP12.12□□□□□ -0.47
LMO4-203ENST00000489303 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 TNFSF11O14788 317 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 CXCL13O43927 109 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 TNFSF13O75888 250 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 H6PDO95479 791 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 PRKCAP17252 672 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 SLC7A1P30825 629 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 SFTPDP35247 375 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 CPOXP36551 454 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 CRATP43155 626 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 CTBP2P56545 445 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 CHRNEQ04844 493 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 SELENBP1Q13228 472 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 SKP2Q13309 424 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 FRRS1Q6ZNA5 592 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 LRRC74BQ6ZQY2 392 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 OLIG3Q7RTU3 272 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 ATP6V1C2Q8NEY4 427 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 OR9I1Q8NGQ6 314 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 ZNF563Q8TA94 476 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 ZFP90Q8TF47 636 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 ST8SIA1Q92185 356 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 OSTF1Q92882 214 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 VPS33AQ96AX1 596 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 ADGRG7Q96K78 797 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 NPAS1Q99742 590 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 SLC39A3Q9BRY0 314 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 RAD21L1Q9H4I0 556 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 MTHFD2LQ9H903 347 aaPredicted RBP12.12□□□□□ -0.47
LMO4-203ENST00000489303 GLRX2Q9NS18 164 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 CALML5Q9NZT1 146 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 CRIM1Q9NZV1 1036 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 P2RX2Q9UBL9 471 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 KCNE5Q9UJ90 142 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 PROCRQ9UNN8 238 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 SPG11Q96JI7 2443 aa12.12□□□□□ -0.47
LMO4-203ENST00000489303 NUP214P35658 2090 aaPredicted RBP12.12□□□□□ -0.47
LMO4-203ENST00000489303 ZNF469Q96JG9 3925 aaPredicted RBP12.12□□□□□ -0.47
LMO4-203ENST00000489303 A0A0J9YW62 118 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 A8MXE2 369 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 DNAJA1P31689 397 aaKnown RBP12.11□□□□□ -0.47
LMO4-203ENST00000489303 KIR2DL2P43627 348 aaPredicted RBP12.11□□□□□ -0.47
LMO4-203ENST00000489303 SLC6A8P48029 635 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 KCNJ5P48544 419 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 MRPL19P49406 292 aaKnown RBP12.11□□□□□ -0.47
LMO4-203ENST00000489303 ART1P52961 327 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 KCNJ10P78508 379 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 FUT5Q11128 374 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 TOMM34Q15785 309 aaPredicted RBP12.11□□□□□ -0.47
LMO4-203ENST00000489303 MAPK14Q16539 360 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 SYPL1Q16563 259 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 CTU2Q2VPK5 515 aaKnown RBP12.11□□□□□ -0.47
LMO4-203ENST00000489303 TMEM176BQ3YBM2 270 aaPredicted RBP12.11□□□□□ -0.47
LMO4-203ENST00000489303 SLC25A53Q5H9E4 307 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 FBXW10Q5XX13 1052 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 AP1ARQ63HQ0 302 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 FAM214BQ7L5A3 538 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 CMIPQ8IY22 773 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 ARFGAP2Q8N6H7 521 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 ANKFN1Q8N957 763 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 CPNE4Q96A23 557 aaPredicted RBP12.11□□□□□ -0.47
LMO4-203ENST00000489303 STARD4Q96DR4 205 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 GMPPAQ96IJ6 420 aaPredicted RBP12.11□□□□□ -0.47
LMO4-203ENST00000489303 EBF4Q9BQW3 602 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 RABEP2Q9H5N1 569 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 TPT1P8Q9HAU6 139 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 FANCFQ9NPI8 374 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 TMEM45AQ9NWC5 275 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 GALNT8Q9NY28 637 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 NDRG3Q9UGV2 375 aa12.11□□□□□ -0.47
LMO4-203ENST00000489303 SPIN1Q9Y657 262 aaPredicted RBP12.11□□□□□ -0.47
LMO4-203ENST00000489303 NF1P21359 2839 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms