RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 CTNNBL1Q8WYA6 563 aaPredicted RBP2.29□□□□□ -2.04
CD46-215ENST00000488596 FAM122AQ96E09 287 aa2.29□□□□□ -2.04
CD46-215ENST00000488596 FAHD2AQ96GK7 314 aa2.29□□□□□ -2.04
CD46-215ENST00000488596 B3GALT6Q96L58 329 aa2.29□□□□□ -2.04
CD46-215ENST00000488596 MAGEB18Q96M61 343 aa2.29□□□□□ -2.04
CD46-215ENST00000488596 ZIM3Q96PE6 472 aa2.29□□□□□ -2.04
CD46-215ENST00000488596 TECTBQ96PL2 329 aa2.29□□□□□ -2.04
CD46-215ENST00000488596 RNF126Q9BV68 326 aa2.29□□□□□ -2.04
CD46-215ENST00000488596 RAB33BQ9H082 229 aa2.29□□□□□ -2.04
CD46-215ENST00000488596 NXF5Q9H1B4 397 aaKnown RBP2.29□□□□□ -2.04
CD46-215ENST00000488596 EHD1Q9H4M9 534 aa2.29□□□□□ -2.04
CD46-215ENST00000488596 ONECUT1Q9UBC0 465 aa2.29□□□□□ -2.04
CD46-215ENST00000488596 LCMT1Q9UIC8 334 aa2.29□□□□□ -2.04
CD46-215ENST00000488596 ZNF256Q9Y2P7 627 aaPredicted RBP2.29□□□□□ -2.04
CD46-215ENST00000488596 OR10H1Q9Y4A9 318 aa2.29□□□□□ -2.04
CD46-215ENST00000488596 ALG6Q9Y672 507 aa2.29□□□□□ -2.04
CD46-215ENST00000488596 FRMPD3Q5JV73 1810 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 SMIM28A0A1B0GU29 152 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 PP2D1A8MPX8 630 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 K7N7A8 449 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 NDC80O14777 642 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 HDAC3O15379 428 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 TBL1XO60907 577 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 LYPLA1O75608 230 aaPredicted RBP2.28□□□□□ -2.04
CD46-215ENST00000488596 PTMAP06454 111 aaKnown RBP2.28□□□□□ -2.04
CD46-215ENST00000488596 RPA2P15927 270 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 PGCP20142 388 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 HNRNPA2B1P22626 353 aaKnown RBP2.28□□□□□ -2.04
CD46-215ENST00000488596 PSMA5P28066 241 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 HOXD10P28358 340 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 AQP1P29972 269 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 CHI3L1P36222 383 aaPredicted RBP2.28□□□□□ -2.04
CD46-215ENST00000488596 KIR2DS2P43631 304 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 HSPA2P54652 639 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 RIPK4P57078 832 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 LYZP61626 148 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 RIPPLY1Q0D2K3 151 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 PDK4Q16654 411 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 TP53I3Q53FA7 332 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 SPATA46Q5T0L3 261 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 RSBN1Q5VWQ0 802 aaPredicted RBP2.28□□□□□ -2.04
CD46-215ENST00000488596 TFAP2EQ6VUC0 442 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 DNM1P46Q6ZS02 220 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 HSD17B13Q7Z5P4 300 aaPredicted RBP2.28□□□□□ -2.04
CD46-215ENST00000488596 TMEM179BQ7Z7N9 219 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 VASH2Q86V25 355 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 MTURNQ8N3F0 131 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 TEX9Q8N6V9 391 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 C14orf178Q8N769 122 aaPredicted RBP2.28□□□□□ -2.04
CD46-215ENST00000488596 C15orf54Q8N8G6 183 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 NEIL2Q969S2 332 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 FGGYQ96C11 551 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 RIT2Q99578 217 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 ERP44Q9BS26 406 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 CNPY3Q9BT09 278 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 EDEM2Q9BV94 578 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 SPATA16Q9BXB7 569 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 ISG20L2Q9H9L3 353 aaKnown RBP2.28□□□□□ -2.04
CD46-215ENST00000488596 PDFQ9HBH1 243 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 ABCB10Q9NRK6 738 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 SIGLEC8Q9NYZ4 499 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 PRO0461Q9UI25 63 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 SNX6Q9UNH7 406 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 CELA1Q9UNI1 258 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 WDR45Q9Y484 360 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 ATP6V0A2Q9Y487 856 aa2.28□□□□□ -2.04
CD46-215ENST00000488596 IGHV2-70DA0A0C4DH43 119 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 FAM231BA6NCW3 169 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 VSTM2BA6NLU5 285 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 B4DXG7 233 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 G3V4G9 280 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 MSH4O15457 936 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 ZNF264O43296 627 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 KIAA0754O94854 1291 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 GNA14O95837 355 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 TIMP1P01033 207 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 SEMG1P04279 462 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 UGT2B4P06133 528 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 CYP2B6P20813 491 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 HNF1AP20823 631 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 SLC26A2P50443 739 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 EFNA3P52797 238 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 RIPPLY3P57055 190 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 OC90Q02509 493 aaPredicted RBP2.27□□□□□ -2.05
CD46-215ENST00000488596 ELAVL3Q14576 367 aaKnown RBP2.27□□□□□ -2.05
CD46-215ENST00000488596 HERPUD1Q15011 391 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 TPD52L1Q16890 204 aaPredicted RBP2.27□□□□□ -2.05
CD46-215ENST00000488596 TATDN3Q17R31 274 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 C10orf120Q5SQS8 335 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 LIPNQ5VXI9 398 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 ZNF589Q86UQ0 364 aaPredicted RBP2.27□□□□□ -2.05
CD46-215ENST00000488596 LCA5Q86VQ0 697 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 ATP6V0D2Q8N8Y2 350 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 STXBP6Q8NFX7 210 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 OR2T3Q8NH03 318 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 FAM3CQ92520 227 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 AMDHD1Q96NU7 426 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 PLEKHF1Q96S99 279 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 MCHR1Q99705 422 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 ALG12Q9BV10 488 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms