RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 CENPMQ9NSP4 180 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 GTSE1Q9NYZ3 720 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 RCOR3Q9P2K3 495 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-216ENST00000487043 LHX3Q9UBR4 397 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 KCNG2Q9UJ96 466 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 PPP1R3CQ9UQK1 317 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.45□□□□□ -1.86
PTCD3-216ENST00000487043 PLXNA4Q9HCM2 1894 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 ZNF638Q14966 1978 aaKnown RBP3.44□□□□□ -1.86
PTCD3-216ENST00000487043 PLXNA3P51805 1871 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 SYNJ2BP-COX16A0A087WUM0 186 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 FAM230AA0A1W2PPH8 454 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 C15orf61A6NNL5 157 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 A8MU76 341 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 APOC4-APOC2K7ER74 178 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 LGALS8O00214 317 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 SH2D1BO14796 132 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 LANCL1O43813 399 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 CST8O60676 142 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 APOC2P02655 101 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 RRASP10301 218 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 SLC2A3P11169 496 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 MBL2P11226 248 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-216ENST00000487043 CCR1P32246 355 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 CA8P35219 290 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 ATP5C1P36542 298 aaKnown RBP3.44□□□□□ -1.86
PTCD3-216ENST00000487043 COILP38432 576 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-216ENST00000487043 SLC6A8P48029 635 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 IFNAR2P48551 515 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 FNTAP49354 379 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 SNRPD1P62314 119 aaKnown RBP3.44□□□□□ -1.86
PTCD3-216ENST00000487043 RPS4XP62701 263 aaKnown RBP3.44□□□□□ -1.86
PTCD3-216ENST00000487043 DR1Q01658 176 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 HSF2Q03933 536 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 C2orf54Q08AI8 447 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 FUT7Q11130 342 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 OVGP1Q12889 678 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 TFDP2Q14188 446 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 DPYSL3Q14195 570 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 P2RY14Q15391 338 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 RFTN2Q52LD8 501 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-216ENST00000487043 RIPPLY2Q5TAB7 128 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 SULT1C3Q6IMI6 304 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 CCDC137Q6PK04 289 aaKnown RBP3.44□□□□□ -1.86
PTCD3-216ENST00000487043 Q6ZRG5 221 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 Q6ZSR9 355 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 TMEM150AQ86TG1 271 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 CUZD1Q86UP6 607 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 TAC4Q86UU9 113 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 SLC22A16Q86VW1 577 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 APLFQ8IW19 511 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-216ENST00000487043 PYROXD2Q8N2H3 581 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 PQLC3Q8N755 202 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 BANPQ8N9N5 519 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 OR9Q2Q8NGE9 314 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 OR5M9Q8NGP3 310 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 SPATA3Q8NHX4 192 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 CCDC26Q8TAB7 109 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 C1orf54Q8WWF1 131 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 LIPHQ8WWY8 451 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 TMEM37Q8WXS4 190 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 THRSPQ92748 146 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 MAGOHBQ96A72 148 aaKnown RBP3.44□□□□□ -1.86
PTCD3-216ENST00000487043 RAB7BQ96AH8 199 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 RAB40CQ96S21 281 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 KRT12Q99456 494 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 ZNF670Q9BS34 389 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 ZNF416Q9BWM5 594 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 CALN1Q9BXU9 219 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 DGCR6LQ9BY27 220 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 PARD6BQ9BYG5 372 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 NLNQ9BYT8 704 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 FRMD8P1Q9BZ68 369 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-216ENST00000487043 RIBC2Q9H4K1 309 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 DHX35Q9H5Z1 703 aaKnown RBP3.44□□□□□ -1.86
PTCD3-216ENST00000487043 KCNK13Q9HB14 408 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 SLC25A19Q9HC21 320 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 GPATCH2LQ9NWQ4 482 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 DDIT4Q9NX09 232 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 TEX10Q9NXF1 929 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-216ENST00000487043 COX16Q9P0S2 106 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 ATXN10Q9UBB4 475 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 UXTQ9UBK9 157 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-216ENST00000487043 OR12D3Q9UGF7 316 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 PCYOX1Q9UHG3 505 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 BCAP29Q9UHQ4 241 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 LNPEPQ9UIQ6 1025 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 V9GYY5 206 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-216ENST00000487043 MTCL1Q9Y4B5 1905 aaKnown RBP3.44□□□□□ -1.86
PTCD3-216ENST00000487043 CEP290O15078 2479 aa3.44□□□□□ -1.86
PTCD3-216ENST00000487043 GBF1Q92538 1859 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 MKI67P46013 3256 aaKnown RBP3.43□□□□□ -1.86
PTCD3-216ENST00000487043 A0A0U1RQV5 110 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 OR5H15A6NDH6 313 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 ANKRD30BLA7E2S9 258 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 FAM72CH0Y354 149 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 CHADO15335 359 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 COCHO43405 550 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 RAD51CO43502 376 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 OAS1P00973 400 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms