RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 LRRN3E7EW58 273 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 C5orf67F2Z3F1 127 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 TNFRSF10CO14798 259 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 LILRB5O75023 590 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 FBXO45P0C2W1 286 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 ACP2P11117 423 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 MAP3K8P41279 467 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 RAB38P57729 211 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 PRAMEF17Q5VTA0 474 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 DESI1Q6ICB0 168 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 PTCRAQ6ISU1 281 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-216ENST00000486741 ARHGAP11AQ6P4F7 1023 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 OR52I1Q8NGK6 324 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 THAP4Q8WY91 577 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 C4orf36Q96KX1 117 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 MMP28Q9H239 520 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 LRRN3Q9H3W5 708 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 FN3KQ9H479 309 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 GPATCH2Q9NW75 528 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 ZNF236Q9UL36 1845 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 OR6C70A6NIJ9 312 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 ORC5O43913 435 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 KLK3P07288 261 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-216ENST00000486741 RAB15P59190 212 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 BTLAQ7Z6A9 289 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 LAX1Q8IWV1 398 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 TOMM5Q8N4H5 51 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 MEIOBQ8N635 442 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 OR4K17Q8NGC6 315 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 GABARAPL1Q9H0R8 117 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 CHST8Q9H2A9 424 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 UBQLN3Q9H347 655 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 EXO5Q9H790 373 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 HHATLQ9HCP6 504 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 CUTCQ9NTM9 273 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 NLKQ9UBE8 527 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 GPR55Q9Y2T6 319 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-216ENST00000486741 AK6Q9Y3D8 172 aaKnown RBP12.29□□□□□ -0.44
HMGN1-216ENST00000486741 CHD5Q8TDI0 1954 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 C2orf72A6NCS6 295 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 NPIPA5E9PKD4 350 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 ADAM23O75077 832 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 UPK1BO75841 260 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 CD2P06729 351 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 ADH7P40394 386 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 ADAM15Q13444 863 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 RPTNQ6XPR3 784 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 PAQR7Q86WK9 346 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 JAGN1Q8N5M9 183 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 SYT14Q8NB59 555 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 SLC38A1Q9H2H9 487 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 SEMA6CQ9H3T2 930 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 NPIPA1Q9UND3 350 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 IGHV3-20A0A0C4DH32 117 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 ZAR1LA6NP61 321 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 SMAD9O15198 467 aaKnown RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 PPM1BO75688 479 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 RELAQ04206 551 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 SQSTM1Q13501 440 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 ALKBH2Q6NS38 261 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 GOT1L1Q8NHS2 421 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 CNN2Q99439 309 aaKnown RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 GABARAPL3Q9BY60 117 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 B3GNT4Q9C0J1 378 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 OR10A5Q9H207 317 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 FOLH1BQ9HBA9 442 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 EXO1Q9UQ84 846 aaKnown RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 DOCK4Q8N1I0 1966 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 MAGEB4O15481 346 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 SPINT1O43278 529 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 ITGA10O75578 1167 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 ETV5P41161 510 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 SLC1A3P43003 542 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 KIR2DL1P43626 348 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 ETV1P50549 477 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 CARD17Q5XLA6 110 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 BICRALQ6AI39 1079 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 MBOAT2Q6ZWT7 520 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 OR4N2Q8NGD1 307 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 BAHD1Q8TBE0 780 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 PLA2G12AQ9BZM1 189 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 TRPM7Q96QT4 1865 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 SRPX2O60687 465 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 MRPS14O60783 128 aaKnown RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 RHAGQ02094 409 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 SERTAD2Q14140 314 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 ZNF181Q2M3W8 571 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 HSD17B12Q53GQ0 312 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 RPL13AP3Q6NVV1 102 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 ULK3Q6PHR2 472 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 CNIH2Q6PI25 160 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 LRFN4Q6PJG9 635 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 VN1R4Q7Z5H5 301 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 UBE3DQ7Z6J8 389 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 KIAA0907Q7Z7F0 614 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 MINDY2Q8NBR6 621 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 BBS1Q8NFJ9 593 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 NLGN4YQ8NFZ3 816 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 OR5W2Q8NH69 310 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 ATOH1Q92858 354 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms