RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 OFCC1Q8IZS5 231 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 NDNFQ8TB73 568 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 ACTL9Q8TC94 416 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 CFHR4Q92496 578 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 RMND5BQ96G75 393 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-209ENST00000486618 C1orf159Q96HA4 380 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 REXO5Q96IC2 774 aaKnown RBP6.24□□□□□ -1.41
HDAC3-209ENST00000486618 PANX3Q96QZ0 392 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 LPAR4Q99677 370 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 CCDC28BQ9BUN5 200 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 VN1R1Q9GZP7 353 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 DERL2Q9GZP9 239 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 RGCCQ9H4X1 137 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 C10orf88Q9H8K7 445 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 GPN1Q9HCN4 374 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-209ENST00000486618 DLL4Q9NR61 685 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 AP5S1Q9NUS5 200 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 IL20RAQ9UHF4 553 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 TRMT6Q9UJA5 497 aaKnown RBP6.24□□□□□ -1.41
HDAC3-209ENST00000486618 DTX4Q9Y2E6 619 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 A0A0B4J293 547 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 A0A1W2PPV9 198 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 OR51F1A6NGY5 319 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 ANXA2P2A6NMY6 339 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 HRKO00198 91 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 PRMT5O14744 637 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-209ENST00000486618 HS3ST1O14792 307 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 DNPH1O43598 174 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 NRP2O60462 931 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 CDC40O60508 579 aaKnown RBP eCLIP6.23□□□□□ -1.41
HDAC3-209ENST00000486618 PSIP1O75475 530 aaKnown RBP6.23□□□□□ -1.41
HDAC3-209ENST00000486618 OR2C1O95371 312 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 GOT2P00505 430 aaKnown RBP6.23□□□□□ -1.41
HDAC3-209ENST00000486618 GYPCP04921 128 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 SCG5P05408 212 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 TNFRSF1AP19438 455 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 CCNOP22674 350 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 GIFP27352 417 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 CD40LGP29965 261 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 PTGER1P34995 402 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 RPA3P35244 121 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-209ENST00000486618 XCR1P46094 333 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 BDKRB1P46663 353 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 MEOX1P50221 254 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 CEBPGP53567 150 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 NRG3P56975 720 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 PRPS1P60891 318 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 ADAM8P78325 824 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 POU4F1Q01851 419 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 SSX2Q16385 188 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 ASTE1Q2TB18 679 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-209ENST00000486618 P3H1Q32P28 736 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 MOGAT2Q3SYC2 334 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 WLSQ5T9L3 541 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 WBP2NLQ6ICG8 309 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 LANCL3Q6ZV70 420 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 GPRIN3Q6ZVF9 776 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 ANKRD37Q7Z713 158 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 VTCN1Q7Z7D3 282 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 PAQR7Q86WK9 346 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 CCDC71Q8IV32 467 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-209ENST00000486618 KLHDC8BQ8IXV7 354 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 ZZZ3Q8IYH5 903 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 MARVELD2Q8N4S9 558 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 ARHGEF39Q8N4T4 335 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 CPSF7Q8N684 471 aaKnown RBP6.23□□□□□ -1.41
HDAC3-209ENST00000486618 UXS1Q8NBZ7 420 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 OR8J1Q8NGP2 316 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 OR4L1Q8NH43 312 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 OR51Q1Q8NH59 317 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 ADAMTS16Q8TE57 1224 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 NRG4Q8WWG1 115 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 SMPDL3AQ92484 453 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 PERPQ96FX8 193 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 EGLN2Q96KS0 407 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 OR2A5Q96R48 311 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 CHP1Q99653 195 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 EBNA1BP2Q99848 306 aaKnown RBP6.23□□□□□ -1.41
HDAC3-209ENST00000486618 MFFQ9GZY8 342 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 CDCP1Q9H5V8 836 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 PNO1Q9NRX1 252 aaKnown RBP6.23□□□□□ -1.41
HDAC3-209ENST00000486618 PNPLA3Q9NST1 481 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 PNPOQ9NVS9 261 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 ARMC1Q9NVT9 282 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 NDE1Q9NXR1 346 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 GALNT8Q9NY28 637 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 VSX1Q9NZR4 365 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-209ENST00000486618 KLF13Q9Y2Y9 288 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-209ENST00000486618 PLLPQ9Y342 182 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 TSC22D4Q9Y3Q8 395 aa6.23□□□□□ -1.41
HDAC3-209ENST00000486618 NSD1Q96L73 2696 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-209ENST00000486618 SAC3D1A6NKF1 404 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 FAM171A2A8MVW0 826 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 K7EQM0 130 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 NR5A2O00482 541 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 PFDN6O15212 129 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 HS6ST1O60243 411 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 SRMP19623 302 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 CYLC1P35663 651 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-209ENST00000486618 FEN1P39748 380 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms