RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 RSPO3Q9BXY4 272 aaPredicted RBP11.66□□□□□ -0.54
SSR4-211ENST00000486204 TP63Q9H3D4 680 aaPredicted RBP11.66□□□□□ -0.54
SSR4-211ENST00000486204 TMEM38AQ9H6F2 299 aa11.66□□□□□ -0.54
SSR4-211ENST00000486204 BCL2L10Q9HD36 194 aa11.66□□□□□ -0.54
SSR4-211ENST00000486204 CCM2LQ9NUG4 571 aaPredicted RBP11.66□□□□□ -0.54
SSR4-211ENST00000486204 MED17Q9NVC6 651 aa11.66□□□□□ -0.54
SSR4-211ENST00000486204 CALML5Q9NZT1 146 aa11.66□□□□□ -0.54
SSR4-211ENST00000486204 CORO2BQ9UQ03 480 aa11.66□□□□□ -0.54
SSR4-211ENST00000486204 VDAC3Q9Y277 283 aa11.66□□□□□ -0.54
SSR4-211ENST00000486204 EVPLLA8MZ36 301 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 KDM4EB2RXH2 506 aaPredicted RBP11.65□□□□□ -0.54
SSR4-211ENST00000486204 SHISA8B8ZZ34 492 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 E9PLN8 166 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 H3BNH8 94 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 ADAM11O75078 769 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 CSTAP01040 98 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 COX4I1P13073 169 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 NID1P14543 1247 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 ZNF708P17019 499 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 LHX2P50458 406 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 GZMMP51124 257 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 CLDN18P56856 261 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 KCNJ10P78508 379 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 CYLC2Q14093 348 aaPredicted RBP11.65□□□□□ -0.54
SSR4-211ENST00000486204 TOMM34Q15785 309 aaPredicted RBP11.65□□□□□ -0.54
SSR4-211ENST00000486204 GLYR1Q49A26 553 aaPredicted RBP11.65□□□□□ -0.54
SSR4-211ENST00000486204 GCNT6Q5T4J0 391 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 WLSQ5T9L3 541 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 PRAMEF8Q5VWM4 474 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 PRAMEF7Q5VXH5 474 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 RAET1LQ5VY80 246 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 Q71RC1 249 aaPredicted RBP11.65□□□□□ -0.54
SSR4-211ENST00000486204 NET1Q7Z628 596 aaPredicted RBP11.65□□□□□ -0.54
SSR4-211ENST00000486204 ULK2Q8IYT8 1036 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 TOR1AIP2Q8NFQ8 470 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 OR5M1Q8NGP8 315 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 NFKBIDQ8NI38 313 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 GPR119Q8TDV5 335 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 CA5BP1Q8WTZ4 195 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 PHF10Q8WUB8 498 aaKnown RBP11.65□□□□□ -0.54
SSR4-211ENST00000486204 WDR60Q8WVS4 1066 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 ABTB1Q969K4 478 aaPredicted RBP11.65□□□□□ -0.54
SSR4-211ENST00000486204 RCN3Q96D15 328 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 CCT8L2Q96SF2 557 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 VKORC1Q9BQB6 163 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 LAT2Q9GZY6 243 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 KAT8Q9H7Z6 458 aaKnown RBP11.65□□□□□ -0.54
SSR4-211ENST00000486204 MTHFD2LQ9H903 347 aaPredicted RBP11.65□□□□□ -0.54
SSR4-211ENST00000486204 ADAM21Q9UKJ8 722 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 ACAD8Q9UKU7 415 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 CHST2Q9Y4C5 530 aa11.65□□□□□ -0.54
SSR4-211ENST00000486204 A0A087WZY1 265 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 A0A0G2JPF8 293 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 FIGNL2A6NMB9 653 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 KIAA1324LA8MWY0 1029 aaPredicted RBP11.64□□□□□ -0.55
SSR4-211ENST00000486204 HNRNPCL2B2RXH8 293 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 HNRNPCL3B7ZW38 293 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 ETV2O00321 342 aaPredicted RBP11.64□□□□□ -0.55
SSR4-211ENST00000486204 HNRNPCL1O60812 293 aaKnown RBP11.64□□□□□ -0.55
SSR4-211ENST00000486204 WDR1O75083 606 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 PGM3O95394 542 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 NTN1O95631 604 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 FAM107AO95990 144 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 NPPAP01160 153 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 DBIP07108 87 aaKnown RBP11.64□□□□□ -0.55
SSR4-211ENST00000486204 UBTFL6P0CB48 400 aaPredicted RBP11.64□□□□□ -0.55
SSR4-211ENST00000486204 HNRNPCL4P0DMR1 293 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 CPN1P15169 458 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 ZNF17P17021 662 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 ACVR2AP27037 513 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 STARP49675 285 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 ZNF41P51814 821 aaPredicted RBP11.64□□□□□ -0.55
SSR4-211ENST00000486204 CLDN15P56746 228 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 CDK6Q00534 326 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 FOXF1Q12946 379 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 MMEL1Q495T6 779 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 RABL3Q5HYI8 236 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 MRPL2Q5T653 305 aaKnown RBP11.64□□□□□ -0.55
SSR4-211ENST00000486204 NANOGP8Q6NSW7 305 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 ZNF585AQ6P3V2 769 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 ZNF836Q6ZNA1 936 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 SEM1Q6ZVN7 128 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 EIF3MQ7L2H7 374 aaKnown RBP11.64□□□□□ -0.55
SSR4-211ENST00000486204 BIVMQ86UB2 503 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 VRK2Q86Y07 508 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 CMIPQ8IY22 773 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 ZZZ3Q8IYH5 903 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 GTPBP8Q8N3Z3 284 aaPredicted RBP11.64□□□□□ -0.55
SSR4-211ENST00000486204 METTL25Q8N6Q8 603 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 OR5W2Q8NH69 310 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 BBS10Q8TAM1 723 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 CNOT9Q92600 299 aaKnown RBP11.64□□□□□ -0.55
SSR4-211ENST00000486204 NINJ1Q92982 152 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 ZBTB8AQ96BR9 441 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 ZNF559Q9BR84 538 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 NANOGQ9H9S0 305 aa11.64□□□□□ -0.55
SSR4-211ENST00000486204 EXOSC3Q9NQT5 275 aaKnown RBP11.64□□□□□ -0.55
SSR4-211ENST00000486204 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.64□□□□□ -0.55
SSR4-211ENST00000486204 DNAJB12Q9NXW2 375 aaKnown RBP11.64□□□□□ -0.55
SSR4-211ENST00000486204 SLC35A3Q9Y2D2 325 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms