RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 CPQQ9Y646 472 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 MYO7AQ13402 2215 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 ATG2AQ2TAZ0 1938 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 GREB1Q4ZG55 1949 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 MYO9BQ13459 2157 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 A0A087X0T9 212 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 IGKV3D-20A0A0C4DH25 116 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 MACROD2A1Z1Q3 448 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 MYBPHLA2RUH7 354 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 EEF2KO00418 725 aaKnown RBP4.77□□□□□ -1.65
RTN4-214ENST00000486085 CXCL14O95715 111 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 CALB1P05937 261 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 ABHD2P08910 425 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 FAM228BP0C875 321 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 HOXB8P17481 243 aaPredicted RBP4.77□□□□□ -1.65
RTN4-214ENST00000486085 DNAJB1P25685 340 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 ALDH3B1P43353 468 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 TKTL1P51854 596 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 PPP1R8Q12972 351 aaKnown RBP4.77□□□□□ -1.65
RTN4-214ENST00000486085 TMED1Q13445 227 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 EIF4EBP2Q13542 120 aaPredicted RBP4.77□□□□□ -1.65
RTN4-214ENST00000486085 TMEM44Q2T9K0 475 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 PRAMEF7Q5VXH5 474 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 ETFRF1Q6IPR1 90 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 C16orf87Q6PH81 154 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 TMCO2Q7Z6W1 182 aaPredicted RBP4.77□□□□□ -1.65
RTN4-214ENST00000486085 ACOT1Q86TX2 421 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 ARHGAP18Q8N392 663 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 RNF10Q8N5U6 811 aaKnown RBP4.77□□□□□ -1.65
RTN4-214ENST00000486085 SAMD12Q8N8I0 201 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 CHDHQ8NE62 594 aaPredicted RBP4.77□□□□□ -1.65
RTN4-214ENST00000486085 SLC2A14Q8TDB8 520 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 TAF15Q92804 592 aaKnown RBP eCLIP4.77□□□□□ -1.65
RTN4-214ENST00000486085 MYLPFQ96A32 169 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 PNPLA2Q96AD5 504 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 SLCO4A1Q96BD0 722 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 ANKRD9Q96BM1 317 aaPredicted RBP4.77□□□□□ -1.65
RTN4-214ENST00000486085 RAB39BQ96DA2 213 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 CCDC42Q96M95 316 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 GPR137Q96N19 417 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 SPAG8Q99932 426 aaPredicted RBP4.77□□□□□ -1.65
RTN4-214ENST00000486085 FBXO44Q9H4M3 255 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 DCAF16Q9NXF7 216 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 UVRAGQ9P2Y5 699 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 UXTQ9UBK9 157 aaPredicted RBP4.77□□□□□ -1.65
RTN4-214ENST00000486085 EIF3KQ9UBQ5 218 aaKnown RBP4.77□□□□□ -1.65
RTN4-214ENST00000486085 TRMT6Q9UJA5 497 aaKnown RBP4.77□□□□□ -1.65
RTN4-214ENST00000486085 SCML2Q9UQR0 700 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 MRPS2Q9Y399 296 aaKnown RBP4.77□□□□□ -1.65
RTN4-214ENST00000486085 IKBKGQ9Y6K9 419 aa4.77□□□□□ -1.65
RTN4-214ENST00000486085 PRRC2BQ5JSZ5 2229 aaKnown RBP4.76□□□□□ -1.65
RTN4-214ENST00000486085 A0A1B0GTH9 108 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 BCLAF3A2AJT9 711 aaKnown RBP4.76□□□□□ -1.65
RTN4-214ENST00000486085 SIGLEC16A6NMB1 481 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 TMEM110-MUSTN1A8MSY1 372 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 MEI4A8MW99 385 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 ZNF487B1APH4 448 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 I3L4J1 428 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 SEMA4FO95754 770 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 IGLV3-25P01717 112 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 H2AFZP0C0S5 128 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 HMGA1P17096 107 aaKnown RBP4.76□□□□□ -1.65
RTN4-214ENST00000486085 GATA2P23769 480 aaPredicted RBP4.76□□□□□ -1.65
RTN4-214ENST00000486085 IL4RP24394 825 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 SPRP35270 261 aaPredicted RBP4.76□□□□□ -1.65
RTN4-214ENST00000486085 PGFP49763 221 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 AIF1P55008 147 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 ZFP36L1Q07352 338 aaKnown RBP4.76□□□□□ -1.65
RTN4-214ENST00000486085 GPM6BQ13491 265 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 TSTA3Q13630 321 aaPredicted RBP4.76□□□□□ -1.65
RTN4-214ENST00000486085 EXOSC7Q15024 291 aaKnown RBP4.76□□□□□ -1.65
RTN4-214ENST00000486085 SLC1A5Q15758 541 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 PTPN20Q4JDL3 420 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 GPAT3Q53EU6 434 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 DDI2Q5TDH0 399 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 AGAP7PQ5VUJ5 663 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 NKAIN2Q5VXU1 208 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 SCARA5Q6ZMJ2 495 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 H2AFVQ71UI9 128 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 MCOLN2Q8IZK6 566 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 TEX9Q8N6V9 391 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 POM121L12Q8N7R1 296 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 RTL3Q8N8U3 475 aaKnown RBP4.76□□□□□ -1.65
RTN4-214ENST00000486085 C12orf29Q8N999 325 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 TOMM40LQ969M1 308 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 PSMG2Q969U7 264 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 CHP1Q99653 195 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 RBM24Q9BX46 236 aaKnown RBP4.76□□□□□ -1.65
RTN4-214ENST00000486085 TSGA10Q9BZW7 698 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 MRPL47Q9HD33 250 aaKnown RBP4.76□□□□□ -1.65
RTN4-214ENST00000486085 FETUBQ9UGM5 382 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 CYTH4Q9UIA0 394 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 SPATA2Q9UM82 520 aa4.76□□□□□ -1.65
RTN4-214ENST00000486085 NCOR1O75376 2440 aa4.75□□□□□ -1.65
RTN4-214ENST00000486085 ZNF638Q14966 1978 aaKnown RBP4.75□□□□□ -1.65
RTN4-214ENST00000486085 IGHV3-16A0A0C4DH30 117 aa4.75□□□□□ -1.65
RTN4-214ENST00000486085 HIDE1A8MVS5 230 aa4.75□□□□□ -1.65
RTN4-214ENST00000486085 CHEK1O14757 476 aa4.75□□□□□ -1.65
RTN4-214ENST00000486085 ADAM12O43184 909 aa4.75□□□□□ -1.65
RTN4-214ENST00000486085 ZSCAN12O43309 604 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms