RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ARSKQ6UWY0 536 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 DEF8Q6ZN54 512 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 TSEN54Q7Z6J9 526 aaKnown RBP15.97■□□□□ 0.15
CHMP3-207ENST00000485465 ZDHHC21Q8IVQ6 265 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 C10orf67Q8IYJ2 551 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 PAPD5Q8NDF8 572 aaKnown RBP15.97■□□□□ 0.15
CHMP3-207ENST00000485465 ZNF563Q8TA94 476 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 PHF10Q8WUB8 498 aaKnown RBP15.97■□□□□ 0.15
CHMP3-207ENST00000485465 SLCO4A1Q96BD0 722 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 ZNF524Q96C55 264 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 TRIM2Q9C040 744 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 UBQLN3Q9H347 655 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 MED17Q9NVC6 651 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 B4GALT7Q9UBV7 327 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 NTNG1Q9Y2I2 539 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 ENPP4Q9Y6X5 453 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 MAP1BP46821 2468 aaKnown RBP15.96■□□□□ 0.15
CHMP3-207ENST00000485465 A0A087WZY1 265 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 FAM166BA8MTA8 275 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 FAM47E-STBD1D6RA91 191 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 hCG_2039718K7EN88 272 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 SEMA7AO75326 666 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 ENTPD5O75356 428 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 ITGA2P17301 1181 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 DPP4P27487 766 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 GDF1P27539 372 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 SLC7A1P30825 629 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 MAGEA2P43356 314 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 ZNF41P51814 821 aaPredicted RBP15.96■□□□□ 0.15
CHMP3-207ENST00000485465 COPZ1P61923 177 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 GANABQ14697 944 aaKnown RBP15.96■□□□□ 0.15
CHMP3-207ENST00000485465 INAQ16352 499 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 IQCCQ4KMZ1 466 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 ENTPD8Q5MY95 495 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 PIWIL3Q7Z3Z3 882 aaKnown RBP15.96■□□□□ 0.15
CHMP3-207ENST00000485465 SLC22A16Q86VW1 577 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 TMEM251Q8N6I4 163 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 LSMEM1Q8N8F7 131 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 DTNBP1Q96EV8 351 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 CHID1Q9BWS9 393 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 ZNF703Q9H7S9 590 aaPredicted RBP15.96■□□□□ 0.15
CHMP3-207ENST00000485465 TMEM27Q9HBJ8 222 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 TAS2R10Q9NYW0 307 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 NDUFAF4Q9P032 175 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 DKKL1Q9UK85 242 aa15.96■□□□□ 0.15
CHMP3-207ENST00000485465 MRPS18CQ9Y3D5 142 aaKnown RBP15.96■□□□□ 0.15
CHMP3-207ENST00000485465 TPRP12270 2363 aaKnown RBP15.95■□□□□ 0.14
CHMP3-207ENST00000485465 CPSF4LA6NMK7 179 aaKnown RBP15.95■□□□□ 0.14
CHMP3-207ENST00000485465 ACOT7O00154 380 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 ZIC3O60481 467 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 FKBP6O75344 327 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 GP1BBP13224 206 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 HK1P19367 917 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 SRD5A2P31213 254 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 YAP1P46937 504 aaKnown RBP15.95■□□□□ 0.14
CHMP3-207ENST00000485465 SESN3P58005 492 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 LY6DQ14210 128 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 TOMM20Q15388 145 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 OR1Q1Q15612 314 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 PLPPR5Q32ZL2 321 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 RNFT1Q5M7Z0 435 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 WBP2NLQ6ICG8 309 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 PLEKHM3Q6ZWE6 761 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 TSPYL5Q86VY4 417 aaPredicted RBP15.95■□□□□ 0.14
CHMP3-207ENST00000485465 CADM2Q8N3J6 435 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 TEX19Q8NA77 164 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 TMEM234Q8WY98 164 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 ST8SIA1Q92185 356 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 ZNF300Q96RE9 604 aaPredicted RBP15.95■□□□□ 0.14
CHMP3-207ENST00000485465 TAAR6Q96RI8 345 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 POLR2J2Q9GZM3 115 aaKnown RBP15.95■□□□□ 0.14
CHMP3-207ENST00000485465 POLR2J3Q9H1A7 115 aaKnown RBP15.95■□□□□ 0.14
CHMP3-207ENST00000485465 CTPS2Q9NRF8 586 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 ACER3Q9NUN7 267 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 QPCTLQ9NXS2 382 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 LUZP4Q9P127 313 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 VDAC3Q9Y277 283 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 FAM32AQ9Y421 112 aaKnown RBP15.95■□□□□ 0.14
CHMP3-207ENST00000485465 PKD1L2Q7Z442 2459 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 NINQ8N4C6 2090 aa15.95■□□□□ 0.14
CHMP3-207ENST00000485465 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 A0A1B0GWA3 101 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 J3KTA2 159 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 ETV2O00321 342 aaPredicted RBP15.94■□□□□ 0.14
CHMP3-207ENST00000485465 TRAPPC6AO75865 159 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 MT-ND1P03886 318 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 HPNP05981 417 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 PRKCAP17252 672 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 RHCEP18577 417 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 MST1P26927 711 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 SLC1A3P43003 542 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 MAGEA5P43359 124 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 DLX5P56178 289 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 ELF3P78545 371 aaPredicted RBP15.94■□□□□ 0.14
CHMP3-207ENST00000485465 KLRB1Q12918 225 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 PIN1Q13526 163 aaPredicted RBP15.94■□□□□ 0.14
CHMP3-207ENST00000485465 GLYR1Q49A26 553 aaPredicted RBP15.94■□□□□ 0.14
CHMP3-207ENST00000485465 ZNF613Q6PF04 617 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 CYP4Z1Q86W10 505 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 FAM109AQ8N4B1 249 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms