RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ICAM5Q9UMF0 924 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 A0A096LNT2 108 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 A8MV72 311 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-227ENST00000485102 ZNF195O14628 629 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 RGS14O43566 566 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 NPHS1O60500 1241 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 PGM3O95394 542 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 NTN1O95631 604 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 CHEK2O96017 543 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 ADAP00813 363 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 ALOX5P09917 674 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 SHC1P29353 583 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 OR3A2P47893 321 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 PRIM2P49643 509 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 P2RX1P51575 399 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 PRKAG1P54619 331 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 TSC22D1Q15714 1073 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 CHRFAM7AQ494W8 412 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 KLHL26Q53HC5 615 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 SLC25A53Q5H9E4 307 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 ATG16L1Q676U5 607 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 Q6ZSR9 355 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 BHLHA15Q7RTS1 189 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-227ENST00000485102 NUDCD3Q8IVD9 361 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 CCNYL1Q8N7R7 359 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 GATSQ8NAP1 163 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 OR10H5Q8NGA6 315 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 NEUROG1Q92886 237 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 CIDECQ96AQ7 238 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-227ENST00000485102 MTERF3Q96E29 417 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 SH3YL1Q96HL8 342 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-227ENST00000485102 MRGPRX4Q96LA9 322 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 PIGUQ9H490 435 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 ALG2Q9H553 416 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 COQ10BQ9H8M1 238 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 YAE1D1Q9NRH1 226 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 TMEM160Q9NX00 188 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 CISD1Q9NZ45 108 aaKnown RBP11.54□□□□□ -0.56
HDAC6-227ENST00000485102 ING1Q9UK53 422 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-227ENST00000485102 EMCNQ9ULC0 261 aa11.54□□□□□ -0.56
HDAC6-227ENST00000485102 HEATR1Q9H583 2144 aaKnown RBP11.53□□□□□ -0.56
HDAC6-227ENST00000485102 TMEM120BA0PK00 339 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 SHISA9B4DS77 424 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 SLC28A1O00337 649 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 ADAM11O75078 769 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 NDUFS7O75251 213 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 SPAG7O75391 227 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 CRCPO75575 148 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 F12P00748 615 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-227ENST00000485102 FAM157CP0CG43 387 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 SFTPDP35247 375 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 THBS2P35442 1172 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 DSCR9P59020 149 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 POU6F2P78424 691 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-227ENST00000485102 ZNF117Q03924 483 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 FOXF1Q12946 379 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 TMEM176BQ3YBM2 270 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-227ENST00000485102 ZNF385BQ569K4 471 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 TIMM23BQ5SRD1 257 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 COX18Q8N8Q8 333 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 ZNF527Q8NB42 609 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 KBTBD8Q8NFY9 601 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 FBXO27Q8NI29 283 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 ZFP90Q8TF47 636 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 PPCDCQ96CD2 204 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 C16orf58Q96GQ5 468 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 HS6ST2Q96MM7 605 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 PSD2Q9BQI7 771 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 RHNO1Q9BSD3 238 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 TNFRSF12AQ9NP84 129 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 KLHL9Q9P2J3 617 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 TMED5Q9Y3A6 229 aa11.53□□□□□ -0.56
HDAC6-227ENST00000485102 ELOA3DA6NLF2 546 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-227ENST00000485102 ZNF724A8MTY0 619 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 TMEM114B3SHH9 223 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 NPIPB9F8W1W9 429 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 DNAJA2O60884 412 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 HMGN2P05204 90 aaKnown RBP11.52□□□□□ -0.57
HDAC6-227ENST00000485102 BPGMP07738 259 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 PRKCAP17252 672 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 DDX5P17844 614 aaKnown RBP11.52□□□□□ -0.57
HDAC6-227ENST00000485102 SDC1P18827 310 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 COX5AP20674 150 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 ENPP1P22413 925 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 ALDH3A1P30838 453 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 ETV4P43268 484 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 LOXL1Q08397 574 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-227ENST00000485102 SELENBP1Q13228 472 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 PPA1Q15181 289 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 ELOA3BQ3SY89 546 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 AGAP6Q5VW22 663 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 ALKBH2Q6NS38 261 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 ANKRD26P1Q6NSI1 321 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 CBLN3Q6UW01 205 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 ATG4DQ86TL0 474 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-227ENST00000485102 ELOA3Q8NG57 546 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 PSMA8Q8TAA3 256 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 PHOSPHO1Q8TCT1 267 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 GPR119Q8TDV5 335 aa11.52□□□□□ -0.57
HDAC6-227ENST00000485102 DYDC1Q8WWB3 177 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms