RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 H2AFXP16104 143 aaPredicted RBP1.66□□□□□ -2.14
VPS50-216ENST00000484954 AHCYP23526 432 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 CYLC1P35663 651 aaPredicted RBP1.66□□□□□ -2.14
VPS50-216ENST00000484954 CRISP3P54108 245 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 ARF5P84085 180 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 BDH1Q02338 343 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 LAGE3Q14657 143 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 PSG5Q15238 335 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 CCDC184Q52MB2 194 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 LINC00483Q53H64 154 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 OR6B2Q6IFH4 312 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 IGFL1Q6UW32 110 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 ARCQ7LC44 396 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 TAF8Q7Z7C8 310 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 ANKRD23Q86SG2 305 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 RALGPS2Q86X27 583 aaPredicted RBP1.66□□□□□ -2.14
VPS50-216ENST00000484954 EFCAB13Q8IY85 973 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 GCNT2Q8N0V5 402 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 LYPD1Q8N2G4 141 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 PNKDQ8N490 385 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 DQX1Q8TE96 717 aaKnown RBP1.66□□□□□ -2.14
VPS50-216ENST00000484954 SLC5A11Q8WWX8 675 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 CHCHD10Q8WYQ3 142 aaPredicted RBP1.66□□□□□ -2.14
VPS50-216ENST00000484954 UCN3Q969E3 161 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 NCLNQ969V3 563 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 FETUBQ9UGM5 382 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 CYTH4Q9UIA0 394 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 ZNF835Q9Y2P0 537 aa1.66□□□□□ -2.14
VPS50-216ENST00000484954 CCDC7Q96M83 1385 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 IGKV1D-17A0A075B6S4 117 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 OR6C65A6NJZ3 312 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 SERPINE3A8MV23 424 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 SULT2B1O00204 365 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 LGALS8O00214 317 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 MED6O75586 246 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 UFL1O94874 794 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 SLITRK3O94933 977 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 HBQ1P09105 142 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 PDHBP11177 359 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 LONP1P36776 959 aaKnown RBP1.65□□□□□ -2.15
VPS50-216ENST00000484954 CUL1Q13616 776 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 ARFRP1Q13795 201 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 PDIA5Q14554 519 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 NDUFA9Q16795 377 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 XKR4Q5GH76 650 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 RABGAP1LQ5R372 815 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 LIPNQ5VXI9 398 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 LRRC70Q7Z2Q7 622 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 VPS36Q86VN1 386 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 NRMQ8IXM6 262 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 MINDY2Q8NBR6 621 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 DUSP18Q8NEJ0 188 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 ANKRD20A12PQ8NF67 263 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 SLC22A8Q8TCC7 542 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 SDSLQ96GA7 329 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 VMP1Q96GC9 406 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 FAM210BQ96KR6 192 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 CEP170P1Q96L14 293 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 OR5B2Q96R09 309 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 PELOQ9BRX2 385 aaKnown RBP1.65□□□□□ -2.15
VPS50-216ENST00000484954 FEM1AQ9BSK4 669 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 TMEM231Q9H6L2 316 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 SYTL2Q9HCH5 934 aa1.65□□□□□ -2.15
VPS50-216ENST00000484954 A0A0G2JLM5 398 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 TMEM150BA6NC51 233 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 KIF2AO00139 706 aaPredicted RBP1.64□□□□□ -2.15
VPS50-216ENST00000484954 DUX1O43812 170 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 KIAA0754O94854 1291 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 PNPP00491 289 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 IGKV1-17P01599 117 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 CSF2P04141 144 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 ALPPP05187 535 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 ZNF286BP0CG31 522 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 RALAP11233 206 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 SH3BGRP55822 239 aaPredicted RBP1.64□□□□□ -2.15
VPS50-216ENST00000484954 YBEYP58557 167 aaPredicted RBP1.64□□□□□ -2.15
VPS50-216ENST00000484954 ACTA1P68133 377 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 SLC10A7Q0GE19 358 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 WASHC5Q12768 1159 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 LDLRAP1Q5SW96 308 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 C1orf146Q5VVC0 180 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 UNC5DQ6UXZ4 953 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 TICAM2Q86XR7 235 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 MFSD6LQ8IWD5 586 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 NKAPP1Q8N9T2 125 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 PHF10Q8WUB8 498 aaKnown RBP1.64□□□□□ -2.15
VPS50-216ENST00000484954 DEDD2Q8WXF8 326 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 ATP6V0A1Q93050 837 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 PGLYRP4Q96LB8 373 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 HDHD3Q9BSH5 251 aaPredicted RBP1.64□□□□□ -2.15
VPS50-216ENST00000484954 RHOJQ9H4E5 214 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 SLC25A22Q9H936 323 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 LPAR2Q9HBW0 351 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 ARGLU1Q9NWB6 273 aaPredicted RBP1.64□□□□□ -2.15
VPS50-216ENST00000484954 KIF25Q9UIL4 384 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 ANAPC7Q9UJX3 599 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 ERVW-1Q9UQF0 538 aa1.64□□□□□ -2.15
VPS50-216ENST00000484954 PLEKHH1Q9ULM0 1364 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 ESYT2A0FGR8 921 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 CFAP73A6NFT4 308 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms