RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 RFLNAQ6ZTI6 216 aa1.91□□□□□ -2.1
SCAF11-207ENST00000484275 IQCA1Q86XH1 822 aa1.91□□□□□ -2.1
SCAF11-207ENST00000484275 ZSCAN4Q8NAM6 433 aaPredicted RBP1.91□□□□□ -2.1
SCAF11-207ENST00000484275 ATP6V1E2Q96A05 226 aa1.91□□□□□ -2.1
SCAF11-207ENST00000484275 CEP170P1Q96L14 293 aa1.91□□□□□ -2.1
SCAF11-207ENST00000484275 TSNARE1Q96NA8 513 aa1.91□□□□□ -2.1
SCAF11-207ENST00000484275 PPDPFQ9H3Y8 114 aa1.91□□□□□ -2.1
SCAF11-207ENST00000484275 HMG20BQ9P0W2 317 aa1.91□□□□□ -2.1
SCAF11-207ENST00000484275 TRIM10Q9UDY6 481 aa1.91□□□□□ -2.1
SCAF11-207ENST00000484275 MTRF1LQ9UGC7 380 aaKnown RBP1.91□□□□□ -2.1
SCAF11-207ENST00000484275 UGT2A1Q9Y4X1 527 aa1.91□□□□□ -2.1
SCAF11-207ENST00000484275 IGLV2-18A0A075B6J9 118 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 A0A0G2JRQ6 117 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 TRBV2A0A0J9YWF9 115 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.9□□□□□ -2.11
SCAF11-207ENST00000484275 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.9□□□□□ -2.11
SCAF11-207ENST00000484275 FAM74A7A6NL05 159 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 LRRC30A6NM36 301 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 WASHC1A8K0Z3 465 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 WASH3PC4AMC7 463 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 GFYI3L273 518 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 ANXA4P09525 319 aaPredicted RBP1.9□□□□□ -2.11
SCAF11-207ENST00000484275 ANXA3P12429 323 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 BCKDHAP12694 445 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 HSPA1LP34931 641 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 ACTN3Q08043 901 aaPredicted RBP1.9□□□□□ -2.11
SCAF11-207ENST00000484275 CHI3L2Q15782 390 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 CCDC57Q2TAC2 916 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 TIGITQ495A1 244 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 FAM74A3Q4VXF1 159 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 ABCA11PQ4W5N1 156 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 WASH2PQ6VEQ5 465 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 LANCL3Q6ZV70 420 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 CCDC91Q7Z6B0 441 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 HMGN2P46Q86SG4 172 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 VRK2Q86Y07 508 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 CNIH3Q8TBE1 160 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 URGCPQ8TCY9 931 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 UCN3Q969E3 161 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 CELF6Q96J87 481 aaKnown RBP1.9□□□□□ -2.11
SCAF11-207ENST00000484275 MS4A14Q96JA4 679 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 CABS1Q96KC9 395 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 RASL11BQ9BPW5 248 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 POLR2J2Q9GZM3 115 aaKnown RBP1.9□□□□□ -2.11
SCAF11-207ENST00000484275 POLR2J3Q9H1A7 115 aaKnown RBP1.9□□□□□ -2.11
SCAF11-207ENST00000484275 MID1IP1Q9NPA3 183 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 ZDHHC4Q9NPG8 344 aa1.9□□□□□ -2.11
SCAF11-207ENST00000484275 EIF3LQ9Y262 564 aaKnown RBP1.9□□□□□ -2.11
SCAF11-207ENST00000484275 H3BMQ9 156 aa1.89□□□□□ -2.11
SCAF11-207ENST00000484275 N4BP1O75113 896 aaKnown RBP1.89□□□□□ -2.11
SCAF11-207ENST00000484275 STX11O75558 287 aa1.89□□□□□ -2.11
SCAF11-207ENST00000484275 TNFSF13O75888 250 aa1.89□□□□□ -2.11
SCAF11-207ENST00000484275 SLC4A1P02730 911 aa1.89□□□□□ -2.11
SCAF11-207ENST00000484275 COX7A1P24310 79 aa1.89□□□□□ -2.11
SCAF11-207ENST00000484275 ATP5A1P25705 553 aaKnown RBP1.89□□□□□ -2.11
SCAF11-207ENST00000484275 HOXA9P31269 272 aa1.89□□□□□ -2.11
SCAF11-207ENST00000484275 CRISP3P54108 245 aa1.89□□□□□ -2.11
SCAF11-207ENST00000484275 EXOSC2Q13868 293 aaKnown RBP1.89□□□□□ -2.11
SCAF11-207ENST00000484275 RABGAP1LQ5R372 815 aa1.89□□□□□ -2.11
SCAF11-207ENST00000484275 TMEM184AQ6ZMB5 413 aa1.89□□□□□ -2.11
SCAF11-207ENST00000484275 LPCAT2Q7L5N7 544 aa1.89□□□□□ -2.11
SCAF11-207ENST00000484275 LRP11Q86VZ4 500 aa1.89□□□□□ -2.11
SCAF11-207ENST00000484275 TTC5Q8N0Z6 440 aa1.89□□□□□ -2.11
SCAF11-207ENST00000484275 PAQR8Q8TEZ7 354 aa1.89□□□□□ -2.11
SCAF11-207ENST00000484275 WRAP53Q9BUR4 548 aaKnown RBP1.89□□□□□ -2.11
SCAF11-207ENST00000484275 BTNL2Q9UIR0 455 aa1.89□□□□□ -2.11
SCAF11-207ENST00000484275 PLLPQ9Y342 182 aa1.89□□□□□ -2.11
SCAF11-207ENST00000484275 DOCK9Q9BZ29 2069 aa1.89□□□□□ -2.11
SCAF11-207ENST00000484275 SNAPINO95295 136 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 IGKV4-1P06312 121 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 RNASE2P10153 161 aaKnown RBP1.88□□□□□ -2.11
SCAF11-207ENST00000484275 GCFC2P16383 781 aaKnown RBP1.88□□□□□ -2.11
SCAF11-207ENST00000484275 SERPINA2P20848 420 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 COPB2P35606 906 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 BDKRB1P46663 353 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 NUMBP49757 651 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 RGS1Q08116 209 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 SCYL2Q6P3W7 929 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 FAM199XQ6PEV8 388 aaPredicted RBP1.88□□□□□ -2.11
SCAF11-207ENST00000484275 UNC5DQ6UXZ4 953 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 MMAAQ8IVH4 418 aaKnown RBP1.88□□□□□ -2.11
SCAF11-207ENST00000484275 MYOCDQ8IZQ8 938 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 C6orf223Q8N319 242 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 CYB561D1Q8N8Q1 229 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 STKLD1Q8NE28 680 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 AENQ8WTP8 325 aaKnown RBP1.88□□□□□ -2.11
SCAF11-207ENST00000484275 GIMAP1Q8WWP7 306 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 IL1F10Q8WWZ1 152 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 EEF2KMTQ96G04 330 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 RPAP3Q9H6T3 665 aaPredicted RBP1.88□□□□□ -2.11
SCAF11-207ENST00000484275 EML4Q9HC35 981 aaKnown RBP1.88□□□□□ -2.11
SCAF11-207ENST00000484275 LHX9Q9NQ69 397 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 AIG1Q9NVV5 245 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 B3GNT2Q9NY97 397 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 CNOT2Q9NZN8 540 aaKnown RBP1.88□□□□□ -2.11
SCAF11-207ENST00000484275 CRLS1Q9UJA2 301 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 APPL1Q9UKG1 709 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 NUDCQ9Y266 331 aa1.88□□□□□ -2.11
SCAF11-207ENST00000484275 STRAPQ9Y3F4 350 aaKnown RBP1.88□□□□□ -2.11
SCAF11-207ENST00000484275 RPGRIP1LQ68CZ1 1315 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms