RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 PHOSPHO1Q8TCT1 267 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 BRIX1Q8TDN6 353 aaKnown RBP12.88□□□□□ -0.35
CLK3-204ENST00000483723 MR1Q95460 341 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 MUL1Q969V5 352 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 ARSGQ96EG1 525 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 LIN37Q96GY3 246 aaPredicted RBP12.88□□□□□ -0.35
CLK3-204ENST00000483723 Q96MT0 163 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 ZPBPQ9BS86 351 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 ULBP3Q9BZM4 244 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 SPRY4Q9C004 299 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 STRADBQ9C0K7 418 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 GPN3Q9UHW5 284 aaPredicted RBP12.88□□□□□ -0.35
CLK3-204ENST00000483723 LOXL2Q9Y4K0 774 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 PCDHGA1Q9Y5H4 931 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 B3GALT1Q9Y5Z6 326 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 CDH10Q9Y6N8 788 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 A0A087WUJ7 227 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 UNC119BA6NIH7 251 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 M0R129 80 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 EIF4E2O60573 245 aaKnown RBP12.87□□□□□ -0.35
CLK3-204ENST00000483723 PTP4A3O75365 173 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 NADKO95544 446 aaPredicted RBP12.87□□□□□ -0.35
CLK3-204ENST00000483723 MT-ND2P03891 347 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 CDK1P06493 297 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 UMODP07911 640 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 IFI30P13284 250 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 NAGAP17050 411 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 PCYT1AP49585 367 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 NEDD8Q15843 81 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 DCAF12Q5T6F0 453 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 IQCF1Q8N6M8 205 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 TCEANCQ8N8B7 351 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 OR5L2Q8NGL0 311 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 GRHL3Q8TE85 626 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 FAR1Q8WVX9 515 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 MYDGFQ969H8 173 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 IL4I1Q96RQ9 567 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 RTN4RQ9BZR6 473 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 ATP13A2Q9NQ11 1180 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 TVP23BQ9NYZ1 205 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 CNOT2Q9NZN8 540 aaKnown RBP12.87□□□□□ -0.35
CLK3-204ENST00000483723 NPFFR2Q9Y5X5 522 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 ZNF318Q5VUA4 2279 aa12.87□□□□□ -0.35
CLK3-204ENST00000483723 EXPH5Q8NEV8 1989 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 HTR3EA5X5Y0 456 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 C9J4A7 227 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 ZNF701M0R085 212 aaPredicted RBP12.86□□□□□ -0.35
CLK3-204ENST00000483723 PPM1BO75688 479 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 CD63P08962 238 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 PIPP12273 146 aaPredicted RBP12.86□□□□□ -0.35
CLK3-204ENST00000483723 MASP1P48740 699 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 FXYD6P3P58550 94 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 MVKQ03426 396 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 SPEM2Q0P670 501 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 NCF4Q15080 339 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 PCOLCEQ15113 449 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 CSRP2Q16527 193 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 WBP2NLQ6ICG8 309 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 CBLN3Q6UW01 205 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 AHSA2Q719I0 299 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 RAB11FIP2Q7L804 512 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 CDK20Q8IZL9 346 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 CADM2Q8N3J6 435 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 SVOPQ8N4V2 548 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 GALNT6Q8NCL4 622 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 OR4Q3Q8NH05 313 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 RNF138Q8WVD3 245 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 C3orf49Q96BT1 292 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 BPIFA2Q96DR5 249 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 TAAR9Q96RI9 348 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 COPS4Q9BT78 406 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 DDA1Q9BW61 102 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 TSSK6Q9BXA6 273 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 DPH1Q9BZG8 443 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 LHPPQ9H008 270 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 TOR4AQ9NXH8 423 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 RPS6KB2Q9UBS0 482 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 CARD8Q9Y2G2 431 aa12.86□□□□□ -0.35
CLK3-204ENST00000483723 A0A1W2PQ72 361 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 EFCAB10A6NFE3 127 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 GTPBP1O00178 669 aaKnown RBP12.85□□□□□ -0.35
CLK3-204ENST00000483723 PRKYO43930 277 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 ZNF354AO60765 605 aaPredicted RBP12.85□□□□□ -0.35
CLK3-204ENST00000483723 ENTPD6O75354 484 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 ZFAND5O76080 213 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 IGF2P01344 180 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 SLC6A8P48029 635 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 NRG3P56975 720 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 COPZ1P61923 177 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 EFR3AQ14156 821 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 IRF3Q14653 427 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 SYT6Q5T7P8 510 aaPredicted RBP12.85□□□□□ -0.35
CLK3-204ENST00000483723 MEDAGQ5VYS4 303 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 RPL13AP3Q6NVV1 102 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 ALDH16A1Q8IZ83 802 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 GATSQ8NAP1 163 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 OR2Y1Q8NGV0 311 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 ELP5Q8TE02 316 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 C8orf44Q96CB5 159 aa12.85□□□□□ -0.35
CLK3-204ENST00000483723 IMMP1LQ96LU5 166 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms