RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 FAM72BQ86X60 149 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 OR6V1Q8N148 313 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 BEND2Q8NDZ0 799 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 SPPL2AQ8TCT8 520 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 TM4SF18Q96CE8 201 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 SPACA7Q96KW9 195 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 TKTL2Q9H0I9 626 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 TMEM185BQ9H7F4 350 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 RPF1Q9H9Y2 349 aaKnown RBP7.29□□□□□ -1.24
COL4A5-205ENST00000483338 MED17Q9NVC6 651 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 FAM86C1Q9NVL1 165 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 RASD1Q9Y272 281 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 ASF1AQ9Y294 204 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 CCL27Q9Y4X3 112 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 OR14I1A6ND48 311 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 J3KTA2 159 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 AK1P00568 194 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 GASTP01350 101 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 THBS1P07996 1170 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 OR1E2P47887 323 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 MTNR1BP49286 362 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 CXCR3P49682 368 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 SLC26A5P58743 744 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 ELAVL1Q15717 326 aaKnown RBP7.29□□□□□ -1.24
COL4A5-205ENST00000483338 CST9Q5W186 159 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 PRSS45Q7RTY3 260 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 ANKRD33Q7Z3H0 272 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 FAM98AQ8NCA5 519 aaKnown RBP7.29□□□□□ -1.24
COL4A5-205ENST00000483338 GMCL1P1Q8NEA9 526 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 HUS1BQ8NHY5 278 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 PHYHIPQ92561 330 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 EMID1Q96A84 441 aaPredicted RBP7.29□□□□□ -1.24
COL4A5-205ENST00000483338 MGME1Q9BQP7 344 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 PDCD2LQ9BRP1 358 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 C1QTNF3Q9BXJ4 246 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 TM6SF2Q9BZW4 377 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 WDCPQ9H6R7 721 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 SEC61A2Q9H9S3 476 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 TAS2R5Q9NYW4 299 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 TESQ9UGI8 421 aaKnown RBP7.29□□□□□ -1.24
COL4A5-205ENST00000483338 LTBP1Q14766 1721 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 ZSWIM8A7E2V4 1837 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 SIP14410 1827 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 GOLGA4Q13439 2230 aaKnown RBP7.29□□□□□ -1.24
COL4A5-205ENST00000483338 PRAMEF25A6NGN4 478 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 ZNF726A6NNF4 738 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 F5H5P2 479 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 PTBP3O95758 552 aaKnown RBP7.29□□□□□ -1.24
COL4A5-205ENST00000483338 TMIGD3P0DMS9 266 aaPredicted RBP7.29□□□□□ -1.24
COL4A5-205ENST00000483338 GAAP10253 952 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 BCKDHAP12694 445 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 GATMP50440 423 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 ART1P52961 327 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 UBE2MP61081 183 aaKnown RBP7.29□□□□□ -1.24
COL4A5-205ENST00000483338 GOLGA7BQ2TAP0 167 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 ZNF574Q6ZN55 896 aaPredicted RBP7.29□□□□□ -1.24
COL4A5-205ENST00000483338 LANCL3Q6ZV70 420 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 SCD5Q86SK9 330 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 TCEANCQ8N8B7 351 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 AQP11Q8NBQ7 271 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 STOML3Q8TAV4 291 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 GPR148Q8TDV2 347 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 MALSU1Q96EH3 234 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 ELF4Q99607 663 aaPredicted RBP7.29□□□□□ -1.24
COL4A5-205ENST00000483338 HRASLSQ9HDD0 168 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 TDP1Q9NUW8 608 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 RCE1Q9Y256 329 aa7.29□□□□□ -1.24
COL4A5-205ENST00000483338 OR51F1A6NGY5 319 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 FAM227AF5H4B4 570 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 FGF16O43320 207 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 CIDEAO60543 219 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 SCN2BO60939 215 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 SOX14O95416 240 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 NFATC1O95644 943 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 HOXC6P09630 235 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 NDUFS1P28331 727 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 OR1E1P30953 314 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 GJA5P36382 358 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 GLP1RP43220 463 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 PITX1P78337 314 aaPredicted RBP7.28□□□□□ -1.24
COL4A5-205ENST00000483338 KIAA0141Q14154 515 aaPredicted RBP7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ODF4Q2M2E3 257 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 FAM46CQ5VWP2 391 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 TIPARPQ7Z3E1 657 aaKnown RBP7.28□□□□□ -1.24
COL4A5-205ENST00000483338 C19orf47Q8N9M1 422 aaKnown RBP7.28□□□□□ -1.24
COL4A5-205ENST00000483338 NUBPLQ8TB37 319 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 STAG3L4Q8TBR4 150 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 HAVCR2Q8TDQ0 301 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 PAQR8Q8TEZ7 354 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 SMAP2Q8WU79 429 aaPredicted RBP7.28□□□□□ -1.24
COL4A5-205ENST00000483338 C22orf15Q8WYQ4 148 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ARL11Q969Q4 196 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 PHYHIPLQ96FC7 376 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ZNF382Q96SR6 550 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 GPR21Q99679 349 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ACBD6Q9BR61 282 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 CERS4Q9HA82 394 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 RPS10P5Q9NQ39 176 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 SEMA3GQ9NS98 782 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 TMEM248Q9NWD8 314 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms