RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 CBLN3Q6UW01 205 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 IKBIPQ70UQ0 350 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 TRIM46Q7Z4K8 759 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 SLC22A9Q8IVM8 553 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 FBXL14Q8N1E6 418 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 COX18Q8N8Q8 333 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 FAM76AQ8TAV0 307 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 ZFP90Q8TF47 636 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 FAM168AQ92567 244 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 ZNF524Q96C55 264 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 L3HYPDHQ96EM0 354 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 CHMP6Q96FZ7 201 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 RADILQ96JH8 1075 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 DHRS9Q9BPW9 319 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 ARPC5LQ9BPX5 153 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 PSD2Q9BQI7 771 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 IQCGQ9H095 443 aaKnown RBP6.52□□□□□ -1.37
CSDE1-206ENST00000483030 GSTO2Q9H4Y5 243 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 COQ10BQ9H8M1 238 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 BCO1Q9HAY6 547 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 CBLN4Q9NTU7 201 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 NPAP1Q9NZP6 1156 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 SH3BP4Q9P0V3 963 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 NTMQ9P121 344 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 KLHL9Q9P2J3 617 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 LPAR3Q9UBY5 353 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 POU2F3Q9UKI9 436 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 CARD8Q9Y2G2 431 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 CR1P17927 2039 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 NPIPA5A0A0B4J1W7 369 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 GOLGA8QA0A0J9YX86 632 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 A0A1W2PQD3 144 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 GOLGA8OA6NCC3 632 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 OR5H1A6NKK0 313 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 NPIPA7E9PJI5 369 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 GOLGA8NF8WBI6 632 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 GOLGA8RI6L899 631 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 GTPBP1O00178 669 aaKnown RBP6.51□□□□□ -1.37
CSDE1-206ENST00000483030 RGS14O43566 566 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 CRCPO75575 148 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 RSL1D1O76021 490 aaKnown RBP6.51□□□□□ -1.37
CSDE1-206ENST00000483030 PGM3O95394 542 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 NPIPA8P0DM63 369 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 IGHV4-31P0DP07 118 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 SRD5A1P18405 259 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 EFNA1P20827 205 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-206ENST00000483030 USF1P22415 310 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-206ENST00000483030 PAX7P23759 505 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 SLC7A1P30825 629 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 THBS2P35442 1172 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 MMP16P51512 607 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 ZNF83P51522 516 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 P2RX1P51575 399 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 RAC3P60763 192 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 POU6F2P78424 691 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-206ENST00000483030 CHRNEQ04844 493 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 KIAA0040Q15053 153 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 NDUFAF6Q330K2 333 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 KLHL26Q53HC5 615 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 ZNF385BQ569K4 471 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 C11orf71Q6IPW1 123 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 C8orf74Q6P047 294 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 ZCCHC12Q6PEW1 402 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 TMEM108Q6UXF1 575 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 TIFABQ6ZNK6 161 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 IL17RELQ6ZVW7 336 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 P2RY8Q86VZ1 359 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 ZNF100Q8IYN0 542 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 MUC15Q8N387 334 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 ZNF433Q8N7K0 673 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-206ENST00000483030 OR52N5Q8NH56 324 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 RFWD2Q8NHY2 731 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 ZFP28Q8NHY6 868 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 GPR119Q8TDV5 335 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 C10orf105Q8TEF2 133 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 IFT81Q8WYA0 676 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 JADE3Q92613 823 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 ZNF75CPQ92670 426 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-206ENST00000483030 CDS1Q92903 461 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 PPCDCQ96CD2 204 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 MS4A4EQ96PG1 132 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 ZNF300Q96RE9 604 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-206ENST00000483030 BTBD2Q9BX70 525 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 C1QTNF6Q9BXI9 259 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 PIF1Q9H611 641 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 REEP4Q9H6H4 257 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 CHODLQ9H9P2 273 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 RRAGDQ9NQL2 400 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-206ENST00000483030 GIN1Q9NXP7 522 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 BAIAP2L1Q9UHR4 511 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 ICAM5Q9UMF0 924 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 MGAT4BQ9UQ53 548 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 CCL27Q9Y4X3 112 aa6.51□□□□□ -1.37
CSDE1-206ENST00000483030 GPC6Q9Y625 555 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-206ENST00000483030 CADP27708 2225 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 A0A087WUV0 522 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-206ENST00000483030 LOC100289279A0A1B0GTE1 492 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 EXOC1LA0A1B0GW35 172 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 A0A1W2PR80 420 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 CIB4A0PJX0 185 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms