RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 FAM71F2Q6NXP2 309 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 DOK6Q6PKX4 331 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 SHC4Q6S5L8 630 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 PGAP1Q75T13 922 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 ZNF534Q76KX8 674 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 H2BFWTQ7Z2G1 175 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 CPEB2Q7Z5Q1 589 aaKnown RBP3.69□□□□□ -1.82
VPS41-212ENST00000482217 PIP4P1Q86T03 277 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 HPS6Q86YV9 775 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 FAM71AQ8IYT1 594 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 ENTHD1Q8IYW4 607 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 HS3ST5Q8IZT8 346 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 SYS1Q8N2H4 156 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 TRAM1L1Q8N609 369 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 LRRC57Q8N9N7 239 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 ADAD2Q8NCV1 583 aaKnown RBP3.69□□□□□ -1.82
VPS41-212ENST00000482217 OR1F12Q8NHA8 337 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 MAGEC3Q8TD91 643 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 ADAMTS14Q8WXS8 1223 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 NTAN1Q96AB6 310 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 FAM131CQ96AQ9 280 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 C10orf90Q96M02 699 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 ZNF75AQ96N20 296 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 TSSK2Q96PF2 358 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 OR5B2Q96R09 309 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 IL4I1Q96RQ9 567 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 MBOAT4Q96T53 435 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 NICN1Q9BSH3 213 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 ULBP2Q9BZM5 246 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 BCL2L14Q9BZR8 327 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 C5orf66Q9H5L9 145 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 MAP6D1Q9H9H5 199 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 ANKHQ9HCJ1 492 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 FZD3Q9NPG1 666 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 HINT3Q9NQE9 182 aaKnown RBP3.69□□□□□ -1.82
VPS41-212ENST00000482217 C1RLQ9NZP8 487 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 UVRAGQ9P2Y5 699 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 GNG12Q9UBI6 72 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 EPHA6Q9UF33 1036 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 ACSL5Q9ULC5 683 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 WDR45Q9Y484 360 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 TIMM10BQ9Y5J6 103 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 HS3ST3B1Q9Y662 390 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 ELP1O95163 1332 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 CACNA1IQ9P0X4 2223 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 CKAP5Q14008 2032 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 KCNE1BA0A087WTH5 132 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 PPIAL4CA0A0B4J2A2 164 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 GNG14A0A1W2PPG7 69 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 ANTXRLA6NF34 631 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 TMEM202A6NGA9 273 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 FRG2CA6NGY1 282 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 HSPB6O14558 160 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 TFECO14948 347 aaPredicted RBP3.68□□□□□ -1.82
VPS41-212ENST00000482217 STX7O15400 261 aaKnown RBP3.68□□□□□ -1.82
VPS41-212ENST00000482217 PCDH7O60245 1069 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 PAPSS2O95340 614 aaPredicted RBP3.68□□□□□ -1.82
VPS41-212ENST00000482217 DEXIO95424 95 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 FADS2O95864 444 aaKnown RBP3.68□□□□□ -1.82
VPS41-212ENST00000482217 DHFRP00374 187 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 PPIAL4GP0DN37 164 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 RNH1P13489 461 aaKnown RBP3.68□□□□□ -1.82
VPS41-212ENST00000482217 PMCHP20382 165 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 M6PRP20645 277 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 LMO1P25800 156 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 EPHA2P29317 976 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 HMOX2P30519 316 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 GNPDA1P46926 289 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 CSNK1A1P48729 337 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 NPY2RP49146 381 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 RASSF2P50749 326 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 LSM6P62312 80 aaKnown RBP3.68□□□□□ -1.82
VPS41-212ENST00000482217 MYL7Q01449 175 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 EWSR1Q01844 656 aaKnown RBP eCLIP3.68□□□□□ -1.82
VPS41-212ENST00000482217 GUCY2DQ02846 1103 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 GABPAQ06546 454 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 IL10RBQ08334 325 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 PNRC1Q12796 327 aaPredicted RBP3.68□□□□□ -1.82
VPS41-212ENST00000482217 ILF2Q12905 390 aaKnown RBP3.68□□□□□ -1.82
VPS41-212ENST00000482217 CTTNQ14247 550 aaKnown RBP3.68□□□□□ -1.82
VPS41-212ENST00000482217 GPNMBQ14956 572 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 HLFQ16534 295 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 CDKN3Q16667 212 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 EIF2S3LQ2VIR3 472 aaKnown RBP3.68□□□□□ -1.82
VPS41-212ENST00000482217 SYT14P1Q58G82 188 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 C1orf220Q5T0J3 134 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 OTUD3Q5T2D3 398 aaPredicted RBP3.68□□□□□ -1.82
VPS41-212ENST00000482217 LCN10Q6JVE6 187 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 C11orf63Q6NUN7 778 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 CEACAM20Q6UY09 585 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 ZNF562Q6V9R5 426 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 TPRG1Q6ZUI0 275 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 LINGO2Q7L985 606 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 SETD3Q86TU7 594 aaPredicted RBP3.68□□□□□ -1.82
VPS41-212ENST00000482217 AMIGO1Q86WK6 493 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 HIPK1Q86Z02 1210 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 DCP1BQ8IZD4 617 aaKnown RBP3.68□□□□□ -1.82
VPS41-212ENST00000482217 SPAG16Q8N0X2 631 aa3.68□□□□□ -1.82
VPS41-212ENST00000482217 C2orf73Q8N5S3 287 aaPredicted RBP3.68□□□□□ -1.82
VPS41-212ENST00000482217 NATD1Q8N6N6 113 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms