RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ENPP1P22413 925 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 SLC1A6P48664 564 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 TMEM201Q5SNT2 666 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 GTF2IRD2BQ6EKJ0 949 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 BHLHB9Q6PI77 547 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 FCRLAQ7L513 359 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 GTF2IRD2Q86UP8 949 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 STK32CQ86UX6 486 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 LSRQ86X29 649 aaPredicted RBP16.53■□□□□ 0.24
CLK1-211ENST00000481641 OR5W2Q8NH69 310 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 ZFP90Q8TF47 636 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 PIGTQ969N2 578 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 CPNE4Q96A23 557 aaPredicted RBP16.53■□□□□ 0.24
CLK1-211ENST00000481641 PERPQ96FX8 193 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 PIP5K1AQ99755 562 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 THUMPD3Q9BV44 507 aaKnown RBP16.53■□□□□ 0.24
CLK1-211ENST00000481641 DPY30Q9C005 99 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 QRSL1Q9H0R6 528 aaKnown RBP16.53■□□□□ 0.24
CLK1-211ENST00000481641 OR51I1Q9H343 314 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 TIGARQ9NQ88 270 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 RAP2CQ9Y3L5 183 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 RNASET2O00584 256 aaKnown RBP16.52■□□□□ 0.24
CLK1-211ENST00000481641 BIRC5O15392 142 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 ARHGEF9O43307 516 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 EIF4E2O60573 245 aaKnown RBP16.52■□□□□ 0.24
CLK1-211ENST00000481641 SOX30O94993 753 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 C1QCP02747 245 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 INHBBP09529 407 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 MYZAPP0CAP1 466 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 DHRS4L1P0CG22 281 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 OR12D1P0DN82 309 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 PPP3CBP16298 524 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 ADSLP30566 484 aaPredicted RBP16.52■□□□□ 0.24
CLK1-211ENST00000481641 RPL14P50914 215 aaKnown RBP16.52■□□□□ 0.24
CLK1-211ENST00000481641 SMU1Q2TAY7 513 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 ARHGAP11BQ3KRB8 267 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 BEX5Q5H9J7 111 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 TFAP2EQ6VUC0 442 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 HMGN2P46Q86SG4 172 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 CIARTQ8N365 385 aaPredicted RBP16.52■□□□□ 0.24
CLK1-211ENST00000481641 TOR1AIP2Q8NFQ8 470 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 RAB8BQ92930 207 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 PLPPR2Q96GM1 343 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 MRGPRX4Q96LA9 322 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 ZIM3Q96PE6 472 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 NUF2Q9BZD4 464 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 NMUR2Q9GZQ4 415 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 LAT2Q9GZY6 243 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 KCNK9Q9NPC2 374 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 PNPOQ9NVS9 261 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 KLHL13Q9P2N7 655 aa16.52■□□□□ 0.24
CLK1-211ENST00000481641 DUXAA6NLW8 204 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 GJE1A6NN92 205 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 C9JVG2 144 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 BCAS1O75363 584 aaPredicted RBP16.51■□□□□ 0.23
CLK1-211ENST00000481641 STX11O75558 287 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 GCM2O75603 506 aaPredicted RBP16.51■□□□□ 0.23
CLK1-211ENST00000481641 UGT2B17O75795 530 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 PRKD3O94806 890 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 H6PDO95479 791 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 PABPC4LP0CB38 370 aaKnown RBP16.51■□□□□ 0.23
CLK1-211ENST00000481641 NME5P56597 212 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 SELENBP1Q13228 472 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 SKP2Q13309 424 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 CBFBQ13951 182 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 RNPS1Q15287 305 aaKnown RBP16.51■□□□□ 0.23
CLK1-211ENST00000481641 ZNF141Q15928 474 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 MAPK14Q16539 360 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 TIGD2Q4W5G0 525 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 SLC25A53Q5H9E4 307 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 TNFAIP8L2Q6P589 184 aaPredicted RBP16.51■□□□□ 0.23
CLK1-211ENST00000481641 ZNF704Q6ZNC4 412 aaPredicted RBP16.51■□□□□ 0.23
CLK1-211ENST00000481641 C20orf204Q6ZNR8 217 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 C16orf62Q7Z3J2 963 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 BIVMQ86UB2 503 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 LRRC75A-AS1Q8N1F1 130 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 OR8J2Q8NGG1 315 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 XAGE5Q8WWM1 108 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 S100PBPQ96BU1 408 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 ZNF775Q96BV0 537 aaPredicted RBP16.51■□□□□ 0.23
CLK1-211ENST00000481641 Q96MF0 132 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 SSU72Q9NP77 194 aaKnown RBP16.51■□□□□ 0.23
CLK1-211ENST00000481641 PCDHGB4Q9UN71 923 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.51■□□□□ 0.23
CLK1-211ENST00000481641 GPR52Q9Y2T5 361 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 USF3Q68DE3 2245 aa16.51■□□□□ 0.23
CLK1-211ENST00000481641 ANKRD28O15084 1053 aa16.5■□□□□ 0.23
CLK1-211ENST00000481641 TM9SF1O15321 606 aa16.5■□□□□ 0.23
CLK1-211ENST00000481641 CSTAP01040 98 aa16.5■□□□□ 0.23
CLK1-211ENST00000481641 UBTFL6P0CB48 400 aaPredicted RBP16.5■□□□□ 0.23
CLK1-211ENST00000481641 PSMB1P20618 241 aaKnown RBP16.5■□□□□ 0.23
CLK1-211ENST00000481641 SLC7A1P30825 629 aa16.5■□□□□ 0.23
CLK1-211ENST00000481641 LTBQ06643 244 aa16.5■□□□□ 0.23
CLK1-211ENST00000481641 FUT5Q11128 374 aa16.5■□□□□ 0.23
CLK1-211ENST00000481641 KRTAP21-3Q3LHN1 58 aa16.5■□□□□ 0.23
CLK1-211ENST00000481641 SPANXN4Q5MJ08 99 aa16.5■□□□□ 0.23
CLK1-211ENST00000481641 CEP85LQ5SZL2 805 aa16.5■□□□□ 0.23
CLK1-211ENST00000481641 HEPHL1Q6MZM0 1159 aa16.5■□□□□ 0.23
CLK1-211ENST00000481641 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.5■□□□□ 0.23
CLK1-211ENST00000481641 YTHDF3Q7Z739 585 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms